RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 LSM11P83369 360 aaKnown RBP eCLIP11.3□□□□□ -0.6
NPAS3-209ENST00000551008 IL1RL1Q01638 556 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 ZP4Q12836 540 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 CAMK2DQ13557 499 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 ADIPOQQ15848 244 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 C8orf82Q6P1X6 216 aaPredicted RBP11.3□□□□□ -0.6
NPAS3-209ENST00000551008 PXKQ7Z7A4 578 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 ZNF525Q8N782 197 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 ZNF454Q8N9F8 522 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 PFN4Q8NHR9 129 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 FGFBP3Q8TAT2 258 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 TMEM54Q969K7 222 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 LRR1Q96L50 414 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 HS6ST2Q96MM7 605 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 ECSITQ9BQ95 431 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 CA10Q9NS85 328 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 SELENONQ9NZV5 590 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 ADAM21Q9UKJ8 722 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 CAPN7Q9Y6W3 813 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 DNHD1Q96M86 4753 aa11.3□□□□□ -0.6
NPAS3-209ENST00000551008 CUBNO60494 3623 aa11.29□□□□□ -0.6
NPAS3-209ENST00000551008 IGHV2OR16-5A0A0B4J2B6 119 aa11.29□□□□□ -0.6
NPAS3-209ENST00000551008 SERPINI2O75830 405 aa11.29□□□□□ -0.6
NPAS3-209ENST00000551008 HLA-HP01893 362 aa11.29□□□□□ -0.6
NPAS3-209ENST00000551008 TSPAN19P0C672 248 aa11.29□□□□□ -0.6
NPAS3-209ENST00000551008 ADORA3P0DMS8 318 aa11.29□□□□□ -0.6
NPAS3-209ENST00000551008 OR1E2P47887 323 aa11.29□□□□□ -0.6
NPAS3-209ENST00000551008 PIN1Q13526 163 aaPredicted RBP11.29□□□□□ -0.6
NPAS3-209ENST00000551008 MELKQ14680 651 aa11.29□□□□□ -0.6
NPAS3-209ENST00000551008 CYBRD1Q53TN4 286 aa11.29□□□□□ -0.6
NPAS3-209ENST00000551008 SLC15A3Q8IY34 581 aa11.29□□□□□ -0.6
NPAS3-209ENST00000551008 C10orf53Q8N6V4 93 aa11.29□□□□□ -0.6
NPAS3-209ENST00000551008 TMEM255BQ8WV15 326 aa11.29□□□□□ -0.6
NPAS3-209ENST00000551008 FBXO17Q96EF6 278 aa11.29□□□□□ -0.6
NPAS3-209ENST00000551008 MPP4Q96JB8 637 aa11.29□□□□□ -0.6
NPAS3-209ENST00000551008 SORCS2Q96PQ0 1159 aa11.29□□□□□ -0.6
NPAS3-209ENST00000551008 BARX1Q9HBU1 254 aaPredicted RBP11.29□□□□□ -0.6
NPAS3-209ENST00000551008 C20orf141Q9NUB4 165 aa11.29□□□□□ -0.6
NPAS3-209ENST00000551008 SH3GLB1Q9Y371 365 aa11.29□□□□□ -0.6
NPAS3-209ENST00000551008 ATRQ13535 2644 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 TMEM129A0AVI4 362 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 NME4O00746 187 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 SLC22A2O15244 555 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 AKAP8O43823 692 aaKnown RBP11.28□□□□□ -0.6
NPAS3-209ENST00000551008 GPRIN2O60269 458 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 B4GALT1P15291 398 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 ZNF14P17017 642 aaPredicted RBP11.28□□□□□ -0.6
NPAS3-209ENST00000551008 KDELR2P33947 212 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 NUDT6P53370 316 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 BIDP55957 195 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 RUNX1T1Q06455 604 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 MAPRE2Q15555 327 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 MMEL1Q495T6 779 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 ERICH5Q6P6B1 374 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 TTC33Q6PID6 262 aaPredicted RBP11.28□□□□□ -0.6
NPAS3-209ENST00000551008 LRFN4Q6PJG9 635 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 SLC35D2Q76EJ3 337 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 MICU2Q8IYU8 434 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 DEPDC4Q8N2C3 294 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 OR6X1Q8NH79 312 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 SLC26A7Q8TE54 656 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 ADAD1Q96M93 576 aaKnown RBP11.28□□□□□ -0.6
NPAS3-209ENST00000551008 SEPHS2Q99611 448 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 SH3GL1Q99961 368 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 ULBP2Q9BZM5 246 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 SLC19A3Q9BZV2 496 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 MAN2C1Q9NTJ4 1040 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 RIMS3Q9UJD0 308 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 ZNF229Q9UJW7 825 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 A4GNTQ9UNA3 340 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 SNX13Q9Y5W8 968 aa11.28□□□□□ -0.6
NPAS3-209ENST00000551008 PIP5K1CO60331 668 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 OR7A10O76100 309 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 OR5F1O95221 314 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 CRYAAP02489 173 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 PGA4P0DJD7 388 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 PGA3P0DJD8 388 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 COX4I1P13073 169 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 FUT1P19526 365 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 AHCYP23526 432 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 THBS4P35443 961 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 CSNK1A1P48729 337 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 RPL18Q07020 188 aaKnown RBP11.27□□□□□ -0.61
NPAS3-209ENST00000551008 EFNB3Q15768 340 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 LRRC23Q53EV4 343 aaPredicted RBP11.27□□□□□ -0.61
NPAS3-209ENST00000551008 ZNF813Q6ZN06 617 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 DEF8Q6ZN54 512 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 TSEN54Q7Z6J9 526 aaKnown RBP11.27□□□□□ -0.61
NPAS3-209ENST00000551008 ZNF584Q8IVC4 421 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 NUP37Q8NFH4 326 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 OR2T12Q8NG77 320 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 MOSPD2Q8NHP6 518 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 C10orf105Q8TEF2 133 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 RASSF5Q8WWW0 418 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 PROX1Q92786 737 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 FOXB1Q99853 325 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 PLK3Q9H4B4 646 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 MED4Q9NPJ6 270 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 NANSQ9NR45 359 aa11.27□□□□□ -0.61
NPAS3-209ENST00000551008 MRGBPQ9NV56 204 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms