RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 MRPL19P49406 292 aaKnown RBP4.28□□□□□ -1.72
SCAF11-214ENST00000550893 TMED10P49755 219 aaKnown RBP4.28□□□□□ -1.72
SCAF11-214ENST00000550893 ASCL1P50553 236 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 NUDT6P53370 316 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 CRYBA2P53672 197 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 SLC18A1P54219 525 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 CASP9P55211 416 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 UFM1P61960 85 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 TLE4Q04727 773 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 STX5Q13190 355 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 EFR3AQ14156 821 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 IL13RA2Q14627 380 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 SMU1Q2TAY7 513 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 SLC25A35Q3KQZ1 300 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 SLC25A53Q5H9E4 307 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 DCST2Q5T1A1 773 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 TYW3Q6IPR3 259 aaKnown RBP4.28□□□□□ -1.72
SCAF11-214ENST00000550893 PRSS57Q6UWY2 283 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 IFNEQ86WN2 208 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 GTPBP8Q8N3Z3 284 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-214ENST00000550893 CDRT4Q8N9R6 151 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 DUSP19Q8WTR2 217 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 ZNF75CPQ92670 426 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-214ENST00000550893 RND1Q92730 232 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 TESCQ96BS2 214 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 TRIM44Q96DX7 344 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-214ENST00000550893 AURKBQ96GD4 344 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-214ENST00000550893 CCDC115Q96NT0 180 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 OR7D2Q96RA2 312 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 STACQ99469 402 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 SDF2Q99470 211 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 EBF4Q9BQW3 602 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 WFDC6Q9BQY6 131 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 GPATCH1Q9BRR8 931 aaKnown RBP4.28□□□□□ -1.72
SCAF11-214ENST00000550893 SLC38A1Q9H2H9 487 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 PIGUQ9H490 435 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 CXorf56Q9H5V9 222 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 CHODLQ9H9P2 273 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 CALHM2Q9HA72 323 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 MIEF1Q9NQG6 463 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 ZCCHC3Q9NUD5 404 aaKnown RBP4.28□□□□□ -1.72
SCAF11-214ENST00000550893 MED17Q9NVC6 651 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 GIN1Q9NXP7 522 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 TAS2R10Q9NYW0 307 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 TAS2R9Q9NYW1 312 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 SLC25A37Q9NYZ2 338 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 KLRF1Q9NZS2 232 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 SENP1Q9P0U3 644 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 NLKQ9UBE8 527 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 MARCOQ9UEW3 520 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-214ENST00000550893 ACAD8Q9UKU7 415 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 CAMK2AQ9UQM7 478 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 CFL2Q9Y281 166 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 PCDHGB1Q9Y5G3 927 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 RTTNQ86VV8 2226 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 OR6C68A6NDL8 312 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 ZNF716A6NP11 495 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 A8MXE2 369 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 AP3D1O14617 1153 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 ADAMDEC1O15204 470 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 RGS16O15492 202 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-214ENST00000550893 GMFGO60234 142 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 SS18L1O75177 396 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-214ENST00000550893 CBR3O75828 277 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 TRAPPC6AO75865 159 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 BCAS2O75934 225 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-214ENST00000550893 ZWINTO95229 277 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 OPN1LWP04000 364 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 FCGR1AP12314 374 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 COX6B1P14854 86 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 GABRA1P14867 456 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 ZNF12P17014 697 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 ZNF17P17021 662 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 DDX5P17844 614 aaKnown RBP4.27□□□□□ -1.73
SCAF11-214ENST00000550893 CAPN3P20807 821 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 DEKP35659 375 aaKnown RBP4.27□□□□□ -1.73
SCAF11-214ENST00000550893 PGM1P36871 562 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 ASMTP46597 345 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 P2RY4P51582 365 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 SMSP52788 366 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 ART1P52961 327 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 DSCR4P56555 118 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-214ENST00000550893 MAGOHP61326 146 aaKnown RBP4.27□□□□□ -1.73
SCAF11-214ENST00000550893 CAPRIN1Q14444 709 aaKnown RBP4.27□□□□□ -1.73
SCAF11-214ENST00000550893 FGFBP1Q14512 234 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 ZNF141Q15928 474 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 ZNF239Q16600 458 aaKnown RBP4.27□□□□□ -1.73
SCAF11-214ENST00000550893 IMPG1Q17R60 797 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 IZUMO4Q1ZYL8 232 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 FAM174BQ3ZCQ3 159 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 CFAP157Q5JU67 520 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 PDZK1Q5T2W1 519 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 WLSQ5T9L3 541 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 SPNS3Q6ZMD2 512 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 CNPY4Q8N129 248 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 ANKFN1Q8N957 763 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 CCDC63Q8NA47 563 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 FNDC5Q8NAU1 212 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 LINC01560Q8TB33 94 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 GPR151Q8TDV0 419 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms