RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 C2orf42Q9NWW7 574 aa9.39□□□□□ -0.91
SMARCC2-209ENST00000550164 TBC1D29Q9UFV1 150 aa9.39□□□□□ -0.91
SMARCC2-209ENST00000550164 MYOFQ9NZM1 2061 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 OR5K4A6NMS3 321 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 PLPP2O43688 288 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 GAAP10253 952 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 CLRN1P58418 232 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 VAMP2P63027 116 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 CSNK2A1P68400 391 aaPredicted RBP9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 MEF2DQ14814 521 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 SGCAQ16586 387 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 PLEKHN1Q494U1 663 aaPredicted RBP9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 SPIN3Q5JUX0 258 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 TMEM91Q6ZNR0 172 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 MCATQ8IVS2 390 aaKnown RBP9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 SYS1Q8N2H4 156 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 LINC01555Q8NAE3 123 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 CSNK2A3Q8NEV1 391 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 PELI1Q96FA3 418 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 LINC00615Q96LM1 132 aaPredicted RBP9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 SMIM3Q9BZL3 60 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 PDE7BQ9NP56 450 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 ACKR4Q9NPB9 350 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 RPS10P5Q9NQ39 176 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 UBQLN4Q9NRR5 601 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 CPNE7Q9UBL6 633 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 H3BML4 177 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 PYCARD-AS1I3L0S3 204 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 TGM6O95932 706 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 HPXP02790 462 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 HOXB5P09067 269 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 HNRNPA2B1P22626 353 aaKnown RBP9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 TACR3P29371 465 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 RGS19P49795 217 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 P2RX1P51575 399 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 TRAPPC6BQ86SZ2 158 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 OR10R2Q8NGX6 335 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 WDR76Q9H967 626 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 POLMQ9NP87 494 aaPredicted RBP9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 TAS2R5Q9NYW4 299 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 ING1Q9UK53 422 aaPredicted RBP9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 ENTPD2Q9Y5L3 495 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 LCTP09848 1927 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 SCN4AP35499 1836 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 A0A0A6YYH2 397 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 BORCS7-ASMTA0A0B4J1R7 106 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 A6NJ64 397 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 P2RX6O15547 441 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 CD3DP04234 171 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 IGFBP4P22692 258 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 S100A2P29034 98 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 S100GP29377 79 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 SELENOPP49908 381 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 MAP2K6P52564 334 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 GPR139Q6DWJ6 353 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 ZNF687Q8N1G0 1237 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 LSMEM1Q8N8F7 131 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 WDR89Q96FK6 387 aaPredicted RBP9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 ZNF285Q96NJ3 590 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 CDC6Q99741 560 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 HDAC8Q9BY41 377 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 MSRAQ9UJ68 235 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 SIGLEC7Q9Y286 467 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 KCNIP3Q9Y2W7 256 aa9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 LSM5Q9Y4Y9 91 aaKnown RBP9.38□□□□□ -0.91
SMARCC2-209ENST00000550164 CRTAPO75718 401 aaPredicted RBP9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 SNAPINO95295 136 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 TSPAN15O95858 294 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 APOC1P02654 83 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 MAOAP21397 527 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 C19orf57Q0VDD7 668 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 C1orf189Q5VU69 101 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 TMEM88Q6PEY1 159 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 STAC2Q6ZMT1 411 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 ZNF704Q6ZNC4 412 aaPredicted RBP9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 Q6ZSR6 202 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 OR4C16Q8NGL9 310 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 NKX3-1Q99801 234 aaPredicted RBP9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 METTL7AQ9H8H3 244 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 BIN3Q9NQY0 253 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 CYP8B1Q9UNU6 501 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 MOKQ9UQ07 419 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 EXOGQ9Y2C4 368 aaKnown RBP9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 GOLGB1Q14789 3259 aaKnown RBP9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 FAM186AA6NE01 2351 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 TRAV1-2A0A0B4J238 106 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 GGT3PA6NGU5 568 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 IDSB3KWA1 339 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 ZNF264O43296 627 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 SCGNO76038 276 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 CALCBP10092 127 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 ACHEP22303 614 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 MLC1Q15049 377 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 PRSS53Q2L4Q9 553 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 LGALSLQ3ZCW2 172 aaPredicted RBP9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 RNLSQ5VYX0 342 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 C3orf33Q6P1S2 294 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 NHLRC1Q6VVB1 395 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 Q6ZTK2 550 aa9.37□□□□□ -0.91
SMARCC2-209ENST00000550164 USP53Q70EK8 1073 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms