RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 ISG20Q96AZ6 181 aaKnown RBP2.18□□□□□ -2.06
CCDC38-208ENST00000549876 CXorf40BQ96DE9 158 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 ZNF578Q96N58 590 aaPredicted RBP2.18□□□□□ -2.06
CCDC38-208ENST00000549876 PANX1Q96RD7 426 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 KCNA7Q96RP8 456 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 CYP2S1Q96SQ9 504 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 CNN2Q99439 309 aaKnown RBP2.18□□□□□ -2.06
CCDC38-208ENST00000549876 FMO2Q99518 471 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 MCHR1Q99705 422 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 ARHGDIGQ99819 225 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 CHIAQ9BZP6 476 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 DNTTIP1Q9H147 329 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 PPA2Q9H2U2 334 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 SH2D2AQ9NP31 389 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 B3GNT2Q9NY97 397 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 GCNT4Q9P109 453 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 STOX2Q9P2F5 926 aaPredicted RBP2.18□□□□□ -2.06
CCDC38-208ENST00000549876 PEF1Q9UBV8 284 aaKnown RBP2.18□□□□□ -2.06
CCDC38-208ENST00000549876 WARS2Q9UGM6 360 aaKnown RBP2.18□□□□□ -2.06
CCDC38-208ENST00000549876 RIMS3Q9UJD0 308 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 ANGPTL2Q9UKU9 493 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 COPS3Q9UNS2 423 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 STARD10Q9Y365 291 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 N6AMT1Q9Y5N5 214 aa2.18□□□□□ -2.06
CCDC38-208ENST00000549876 KIF26AQ9ULI4 1882 aaPredicted RBP2.18□□□□□ -2.06
CCDC38-208ENST00000549876 PHLPP2Q6ZVD8 1323 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 IGLV4-60A0A075B6I1 120 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 IQANK1A0A1B0GTG1 560 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 A0A1B0GWB2 263 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 A8MXQ7 604 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 SULT2B1O00204 365 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 HCN1O60741 890 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 H6PDO95479 791 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 GNA14O95837 355 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 PRDX3P30048 256 aaKnown RBP2.17□□□□□ -2.06
CCDC38-208ENST00000549876 HNRNPH3P31942 346 aaKnown RBP2.17□□□□□ -2.06
CCDC38-208ENST00000549876 VHLP40337 213 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 LEPP41159 167 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 PTGDSP41222 190 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 NAMPTP43490 491 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 CDKN1BP46527 198 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 OR1G1P47890 313 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 ACLYP53396 1101 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 CLDN8P56748 225 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 EIF3EP60228 445 aaKnown RBP2.17□□□□□ -2.06
CCDC38-208ENST00000549876 RPS14P62263 151 aaKnown RBP2.17□□□□□ -2.06
CCDC38-208ENST00000549876 KCNJ2P63252 427 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 CUL1Q13616 776 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 VGLL4Q14135 290 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 DOC2AQ14183 400 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 GNMTQ14749 295 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 DGUOKQ16854 277 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 ALKBH6Q3KRA9 238 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 PIP5KL1Q5T9C9 394 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 TSPO2Q5TGU0 170 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 TMEM220Q6QAJ8 160 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 LRRC31Q6UY01 552 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 SSX9Q7RTT3 188 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 CCDC65Q8IXS2 484 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 OTUD6BQ8N6M0 293 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 ZNF321PQ8N8H1 164 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 OR4F6Q8NGB9 312 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 FAM110BQ8TC76 370 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 GPR151Q8TDV0 419 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 ACMSDQ8TDX5 336 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 PLEKHA8Q96JA3 519 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 ZNF641Q96N77 438 aaPredicted RBP2.17□□□□□ -2.06
CCDC38-208ENST00000549876 RNF2Q99496 336 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 C20orf24Q9BUV8 137 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 RNF126Q9BV68 326 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 REEP4Q9H6H4 257 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 TDRD3Q9H7E2 651 aaKnown RBP2.17□□□□□ -2.06
CCDC38-208ENST00000549876 ANKRA2Q9H9E1 313 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 PAK1IP1Q9NWT1 392 aaPredicted RBP2.17□□□□□ -2.06
CCDC38-208ENST00000549876 VANGL2Q9ULK5 521 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 TMCO1Q9UM00 188 aa2.17□□□□□ -2.06
CCDC38-208ENST00000549876 INSRP06213 1382 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 TNIKQ9UKE5 1360 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 TRAV25A0A0B4J276 109 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 A0A1B0GUS0 222 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 TCRBV9S1A1TA0A576 114 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 ZNF705EA8MWA4 302 aaPredicted RBP2.16□□□□□ -2.06
CCDC38-208ENST00000549876 SUPT3HB4E1H0 165 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 GOLGA8TH3BQL2 631 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 HSD17B6O14756 317 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 LSM1O15116 133 aaKnown RBP2.16□□□□□ -2.06
CCDC38-208ENST00000549876 SPOPO43791 374 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 OTCP00480 354 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 LALBAP00709 142 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 P04436 131 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 SERPIND1P05546 499 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 CT62P0C5K7 136 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 CCNB1P14635 433 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 ZNF43P17038 809 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 IFNA8P32881 189 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 DDOSTP39656 456 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 CHRNB3Q05901 458 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 SCRN3Q0VDG4 424 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 PPIL2Q13356 520 aa2.16□□□□□ -2.06
CCDC38-208ENST00000549876 MOBPQ13875 183 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms