RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 SMYD1Q8NB12 490 aa13.09□□□□□ -0.31
SNX29P1-201ENST00000548357 GPR32P1Q8NGA4 272 aa13.09□□□□□ -0.31
SNX29P1-201ENST00000548357 DNAJA4Q8WW22 397 aaPredicted RBP13.09□□□□□ -0.31
SNX29P1-201ENST00000548357 SYT3Q9BQG1 590 aa13.09□□□□□ -0.31
SNX29P1-201ENST00000548357 NARFLQ9H6Q4 476 aa13.09□□□□□ -0.31
SNX29P1-201ENST00000548357 DYNLRB1Q9NP97 96 aa13.09□□□□□ -0.31
SNX29P1-201ENST00000548357 TESQ9UGI8 421 aaKnown RBP13.09□□□□□ -0.31
SNX29P1-201ENST00000548357 USP22Q9UPT9 525 aa13.09□□□□□ -0.31
SNX29P1-201ENST00000548357 C11orf98E9PRG8 122 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 PLPP3O14495 311 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 NCR1O76036 304 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 HPXP02790 462 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 COL8A2P25067 703 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 PTDSS1P48651 473 aaKnown RBP13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 CDH15P55291 814 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 PMS2P3Q13401 168 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 GSG1Q2KHT4 349 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 FAM91A1Q658Y4 838 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 ULK3Q6PHR2 472 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 DLEU7Q6UYE1 221 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 ZNF627Q7L945 461 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 CROCCP2Q86T23 111 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 PAQR4Q8N4S7 273 aaPredicted RBP13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 UBASH3BQ8TF42 649 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 NEU4Q8WWR8 484 aaPredicted RBP13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 YIPF5Q969M3 257 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 MRPL24Q96A35 216 aaKnown RBP13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 SLC47A1Q96FL8 570 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 ANKRD27Q96NW4 1050 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 GMEB1Q9Y692 573 aa13.08□□□□□ -0.32
SNX29P1-201ENST00000548357 FAM157AC9JC47 383 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 POLR3GO15318 223 aaPredicted RBP13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 MFN2O95140 757 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 IFNGR1P15260 489 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 ITGA2P17301 1181 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 GPX2P18283 190 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 PAX7P23759 505 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 GIPRP48546 466 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 CHN2P52757 468 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 BIDP55957 195 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 PCBP3P57721 371 aaKnown RBP13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 PUDPQ08623 228 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 MELKQ14680 651 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 RAB39AQ14964 217 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 FXNQ16595 210 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 DUSP7Q16829 419 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 ALKBH6Q3KRA9 238 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 AGKQ53H12 422 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 BEND6Q5SZJ8 279 aaPredicted RBP13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 C5orf46Q6UWT4 87 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 LINC00114Q6XXX2 140 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 SKA3Q8IX90 412 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 LRRC17Q8N6Y2 441 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 OR6S1Q8NH40 331 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 C7orf26Q96N11 449 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 ARHGDIGQ99819 225 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 FOXB1Q99853 325 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 ULBP2Q9BZM5 246 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 TMEM38AQ9H6F2 299 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 MRPL39Q9NYK5 338 aaKnown RBP13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 CMAHPQ9Y471 501 aa13.07□□□□□ -0.32
SNX29P1-201ENST00000548357 CPSF4LA6NMK7 179 aaKnown RBP13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 AKAP8O43823 692 aaKnown RBP13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 AHCYP23526 432 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 STX1BP61266 288 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 NCALDP61601 193 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 RINLQ6ZS11 566 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 NET1Q7Z628 596 aaPredicted RBP13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 RETREG3Q86VR2 466 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 ARMC8Q8IUR7 673 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 C10orf53Q8N6V4 93 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 SCAIQ8N9R8 606 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 LINC01356Q8N9X3 169 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 OR6T1Q8NGN1 323 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 OR6N1Q8NGY5 312 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 CLDND2Q8NHS1 167 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 GTF3AQ92664 365 aaKnown RBP13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 TMEM54Q969K7 222 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 THOC1Q96FV9 657 aaKnown RBP13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 LRR1Q96L50 414 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 TSPAN32Q96QS1 320 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 MCHR1Q99705 422 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 TMEM43Q9BTV4 400 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 ASPNQ9BXN1 380 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 TMEM27Q9HBJ8 222 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 TMEFF2Q9UIK5 374 aaPredicted RBP13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 POFUT2Q9Y2G5 429 aa13.06□□□□□ -0.32
SNX29P1-201ENST00000548357 SYNGR3O43761 229 aa13.05□□□□□ -0.32
SNX29P1-201ENST00000548357 CLPTM1O96005 669 aa13.05□□□□□ -0.32
SNX29P1-201ENST00000548357 NAT2P11245 290 aa13.05□□□□□ -0.32
SNX29P1-201ENST00000548357 CCL2P13500 99 aa13.05□□□□□ -0.32
SNX29P1-201ENST00000548357 HNF1AP20823 631 aa13.05□□□□□ -0.32
SNX29P1-201ENST00000548357 CRYBA2P53672 197 aa13.05□□□□□ -0.32
SNX29P1-201ENST00000548357 MTPNP58546 118 aa13.05□□□□□ -0.32
SNX29P1-201ENST00000548357 ERVS71-1P61550 626 aa13.05□□□□□ -0.32
SNX29P1-201ENST00000548357 RAB1AP62820 205 aa13.05□□□□□ -0.32
SNX29P1-201ENST00000548357 HNRNPA0Q13151 305 aaKnown RBP13.05□□□□□ -0.32
SNX29P1-201ENST00000548357 RUNDC3AQ59EK9 446 aa13.05□□□□□ -0.32
SNX29P1-201ENST00000548357 KRT73Q86Y46 540 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 173.4 ms