RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 ATP5DP30049 168 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 CTNNA1P35221 906 aaKnown RBP3.57□□□□□ -1.84
CBX5-203ENST00000547872 SSR2P43308 183 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 TMED10P49755 219 aaKnown RBP3.57□□□□□ -1.84
CBX5-203ENST00000547872 EFNA4P52798 201 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 CLDN15P56746 228 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 HILS1P60008 231 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 UBE2HP62256 183 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 BASP1P80723 227 aaKnown RBP3.57□□□□□ -1.84
CBX5-203ENST00000547872 RELAQ04206 551 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 SERTAD2Q14140 314 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 MELKQ14680 651 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 P2RY6Q15077 328 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 PPA1Q15181 289 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 PARP6Q2NL67 630 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 ZNF876PQ49A33 203 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 C6orf163Q5TEZ5 329 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 DHRS7BQ6IAN0 325 aaPredicted RBP3.57□□□□□ -1.84
CBX5-203ENST00000547872 SASS6Q6UVJ0 657 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 CCBE1Q6UXH8 406 aaPredicted RBP3.57□□□□□ -1.84
CBX5-203ENST00000547872 APTXQ7Z2E3 356 aaKnown RBP3.57□□□□□ -1.84
CBX5-203ENST00000547872 SPATA19Q7Z5L4 167 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 LINC00523Q86TU6 105 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 LRRC6Q86X45 466 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 MED12LQ86YW9 2145 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 BPIFB2Q8N4F0 458 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 RNF175Q8N4F7 328 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 NOA1Q8NC60 698 aaKnown RBP3.57□□□□□ -1.84
CBX5-203ENST00000547872 TRPV3Q8NET8 790 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 EXPH5Q8NEV8 1989 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 OR2T12Q8NG77 320 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 OR6K3Q8NGY3 331 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 OR8K3Q8NH51 312 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 MRAPQ8TCY5 172 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 EEF1AKMT1Q8WVE0 214 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 RIT1Q92963 219 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 EXT2Q93063 718 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 MS4A6EQ96DS6 147 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 OMA1Q96E52 524 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 RBM18Q96H35 190 aaKnown RBP3.57□□□□□ -1.84
CBX5-203ENST00000547872 NAP1L5Q96NT1 182 aaPredicted RBP3.57□□□□□ -1.84
CBX5-203ENST00000547872 PPP1R2P1Q96PQ5 205 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 PAFAH2Q99487 392 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 OR2B2Q9GZK3 357 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 RNF122Q9H9V4 155 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 NGBQ9NPG2 151 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 FANCFQ9NPI8 374 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 SCRT2Q9NQ03 307 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 SLC52A3Q9NQ40 469 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 DDX28Q9NUL7 540 aaKnown RBP3.57□□□□□ -1.84
CBX5-203ENST00000547872 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.57□□□□□ -1.84
CBX5-203ENST00000547872 ADPRHL2Q9NX46 363 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 NSMCE4AQ9NXX6 385 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 NPAP1Q9NZP6 1156 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 BCAP29Q9UHQ4 241 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 TRMT6Q9UJA5 497 aaKnown RBP3.57□□□□□ -1.84
CBX5-203ENST00000547872 SLC22A14Q9Y267 594 aa3.57□□□□□ -1.84
CBX5-203ENST00000547872 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.57□□□□□ -1.84
CBX5-203ENST00000547872 SPIN1Q9Y657 262 aaPredicted RBP3.57□□□□□ -1.84
CBX5-203ENST00000547872 NINQ8N4C6 2090 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 YLPM1P49750 1951 aaKnown RBP3.56□□□□□ -1.84
CBX5-203ENST00000547872 LOC100509620A0A075B734 347 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 IGHV3-15A0A0B4J1V0 119 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 PRSS51A0A1B0GVH4 220 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 SH3PXD2BA1X283 911 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 LRIT2A6NDA9 550 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 ANKDD1BA6NHY2 528 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 OR6C76A6NM76 312 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 BTNL10A8MVZ5 291 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 C9JVG2 144 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 LYNX1G3V0Z9 82 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 H3BMM5 538 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 TNFSF11O14788 317 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 CXCL13O43927 109 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 EEDO75530 441 aaKnown RBP3.56□□□□□ -1.84
CBX5-203ENST00000547872 BCL10O95999 233 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 IGHV3-9P01782 118 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 GBAP04062 536 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 CLPSP04118 112 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 IGKV3-11P04433 115 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 CRHP06850 196 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 SERPINA6P08185 405 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 CT62P0C5K7 136 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 ZSCAN5DPP0CG00 497 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 CFC1BP0CG36 223 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 CFC1P0CG37 223 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 IGHV4-38-2P0DP08 117 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 LYNX1P0DP58 116 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 MDKP21741 143 aaPredicted RBP3.56□□□□□ -1.84
CBX5-203ENST00000547872 AGTR1P30556 359 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 PTGDSP41222 190 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 SLC6A12P48065 614 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 CRIP2P52943 208 aaPredicted RBP3.56□□□□□ -1.84
CBX5-203ENST00000547872 UBA52P62987 128 aaKnown RBP3.56□□□□□ -1.84
CBX5-203ENST00000547872 SNX1Q13596 522 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 RCN2Q14257 317 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 EXOSC7Q15024 291 aaKnown RBP3.56□□□□□ -1.84
CBX5-203ENST00000547872 EFTUD2Q15029 972 aaKnown RBP eCLIP3.56□□□□□ -1.84
CBX5-203ENST00000547872 FAM189A2Q15884 450 aa3.56□□□□□ -1.84
CBX5-203ENST00000547872 C9orf135Q5VTT2 229 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms