RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 A0A1W2PRQ8 180 aa16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 H1F0P07305 194 aaKnown RBP16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 ART1P52961 327 aa16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 DGCR6Q14129 220 aa16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 MELKQ14680 651 aa16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 LAPTM4AQ15012 233 aa16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 C1QTNF12Q5T7M4 302 aa16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 ANKRD16Q6P6B7 361 aa16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 KLHL17Q6TDP4 642 aa16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 KLHL24Q6TFL4 600 aa16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 MBOAT2Q6ZWT7 520 aa16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 AKAP1Q92667 903 aaKnown RBP eCLIP16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 MBD6Q96DN6 1003 aa16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 C1orf21Q9H246 121 aa16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 NELFAQ9H3P2 528 aa16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 INIPQ9NRY2 104 aa16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 ACTR3BQ9P1U1 418 aa16.39■□□□□ 0.21
PRPF40B-206ENST00000547764 M0R1B8 84 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 HS3ST1O14792 307 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 PDE5AO76074 875 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 UBOX5O94941 541 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 BCL10O95999 233 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 WNT11O96014 354 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 ITGA2P17301 1181 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 ATP6V1B2P21281 511 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 PTAFRP25105 342 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 CSNK1A1P48729 337 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 ADAM5Q6NVV9 412 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 PODNL1Q6PEZ8 512 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 TMEM108Q6UXF1 575 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 CYP2R1Q6VVX0 501 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 C20orf204Q6ZNR8 217 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 KBTBD8Q8NFY9 601 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 SLC7A13Q8TCU3 470 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 MAGEE2Q8TD90 523 aaPredicted RBP16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 NEUROG1Q92886 237 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 SLC25A44Q96H78 314 aaPredicted RBP16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 PIP5K1AQ99755 562 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 FOXC2Q99958 501 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 OBP2BQ9NPH6 170 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 B3GAT2Q9NPZ5 323 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 PRPF19Q9UMS4 504 aaKnown RBP16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 HIF3AQ9Y2N7 669 aa16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 MAGED1Q9Y5V3 778 aaPredicted RBP16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 RAI1Q7Z5J4 1906 aaPredicted RBP16.38■□□□□ 0.21
PRPF40B-206ENST00000547764 A0A1W2PRG6 482 aa16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 ZNF99A8MXY4 864 aaPredicted RBP16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 EFCAB9A8MZ26 197 aa16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 ABCD4O14678 606 aa16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 SAGP10523 405 aaPredicted RBP16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 CD40P25942 277 aa16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 UBE2NP61088 152 aaKnown RBP16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 RPS4XP62701 263 aaKnown RBP16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 TRIM25Q14258 630 aaKnown RBP16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 DEFB113Q30KQ7 82 aa16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 FGD3Q5JSP0 725 aa16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 RRM2BQ7LG56 351 aa16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 CDK20Q8IZL9 346 aa16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 TMEM54Q969K7 222 aa16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 ZNF566Q969W8 418 aa16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 MCUR1Q96AQ8 359 aa16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 DHRS1Q96LJ7 313 aa16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 ULBP2Q9BZM5 246 aa16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 GLTPQ9NZD2 209 aa16.37■□□□□ 0.21
PRPF40B-206ENST00000547764 DSCAMO60469 2012 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 PRRC2AP48634 2157 aaKnown RBP16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 TRAV27A0A087WT01 109 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 ARPC4-TTLL3A0A0A6YYG9 625 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 TRBV4-1A0A0J9YWV2 114 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 SHISA9B4DS77 424 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 SEC14L2O76054 403 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 FABP3P05413 133 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 PGA4P0DJD7 388 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 PGA3P0DJD8 388 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 HOXB1P14653 301 aaPredicted RBP16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 GPR4P46093 362 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 TUBA1BP68363 451 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 TUBA4AP68366 448 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 MS4A2Q01362 244 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 RUNX1T1Q06455 604 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 FHL1Q13642 323 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 ZNF672Q499Z4 452 aaPredicted RBP16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 ALG10Q5BKT4 473 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 TMPRSS11FQ6ZWK6 438 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 TUBA1AQ71U36 451 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 OAFQ86UD1 273 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 ZNF611Q8N823 705 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 OR52J3Q8NH60 311 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 OR51A7Q8NH64 312 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 ASB10Q8WXI3 467 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 CLPTM1LQ96KA5 538 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 ALPK1Q96QP1 1244 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 TNFRSF13CQ96RJ3 184 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 CCL19Q99731 98 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 CXXC4Q9H2H0 198 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 MUC13Q9H3R2 512 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 IL1RAPQ9NPH3 570 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 MGAT4BQ9UQ53 548 aa16.36■□□□□ 0.21
PRPF40B-206ENST00000547764 POFUT2Q9Y2G5 429 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms