RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 TSSK3Q96PN8 268 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 ULBP2Q9BZM5 246 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 RNF167Q9H6Y7 350 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 ZFP14Q9HCL3 533 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 SLC35D1Q9NTN3 355 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 SMOXQ9NWM0 555 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 BFARQ9NZS9 450 aa1.85□□□□□ -2.11
CCDC38-204ENST00000546816 MRPS33Q9Y291 106 aaKnown RBP1.85□□□□□ -2.11
CCDC38-204ENST00000546816 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.85□□□□□ -2.11
CCDC38-204ENST00000546816 IGHV5-51A0A0C4DH38 117 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 ZNF705GA8MUZ8 300 aaPredicted RBP1.84□□□□□ -2.11
CCDC38-204ENST00000546816 HSD17B6O14756 317 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 MGRN1O60291 552 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 RAMP3O60896 148 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 SMPD2O60906 423 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 NOL3O60936 208 aaKnown RBP1.84□□□□□ -2.11
CCDC38-204ENST00000546816 ENTPD5O75356 428 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 IFNB1P01574 187 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 TLX1NBP0CAT3 122 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 KRT13P13646 458 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 ZNF30P17039 623 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 ATP6V1C1P21283 382 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 BTCP35070 178 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 GRIA1P42261 906 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 SSR1P43307 286 aaKnown RBP1.84□□□□□ -2.11
CCDC38-204ENST00000546816 YAP1P46937 504 aaKnown RBP1.84□□□□□ -2.11
CCDC38-204ENST00000546816 DUSP3P51452 185 aaPredicted RBP1.84□□□□□ -2.11
CCDC38-204ENST00000546816 ACVR1Q04771 509 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 FZD2Q14332 565 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 DGUOKQ16854 277 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 NADK2Q4G0N4 442 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 FILIP1LQ4L180 1135 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 C1orf94Q6P1W5 598 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 NEGR1Q7Z3B1 354 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 TMEM135Q86UB9 458 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 LRP11Q86VZ4 500 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 NUDCD3Q8IVD9 361 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 ZADH2Q8N4Q0 377 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 IPMKQ8NFU5 416 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 PYROXD1Q8WU10 500 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 SH3GL3Q99963 347 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 KCTD14Q9BQ13 255 aaPredicted RBP1.84□□□□□ -2.11
CCDC38-204ENST00000546816 PARP12Q9H0J9 701 aaKnown RBP1.84□□□□□ -2.11
CCDC38-204ENST00000546816 NIPAL2Q9H841 368 aa1.84□□□□□ -2.11
CCDC38-204ENST00000546816 ZNF629Q9UEG4 869 aaPredicted RBP1.84□□□□□ -2.11
CCDC38-204ENST00000546816 PACSIN2Q9UNF0 486 aaPredicted RBP1.84□□□□□ -2.11
CCDC38-204ENST00000546816 NFASCO94856 1347 aa1.84□□□□□ -2.12
CCDC38-204ENST00000546816 MN1Q10571 1320 aaPredicted RBP1.84□□□□□ -2.12
CCDC38-204ENST00000546816 TUBGCP6Q96RT7 1819 aa1.84□□□□□ -2.12
CCDC38-204ENST00000546816 NUP214P35658 2090 aaPredicted RBP1.83□□□□□ -2.12
CCDC38-204ENST00000546816 WDR62O43379 1518 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 INS-IGF2F8WCM5 200 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 H0YHG0 523 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 PRRG1O14668 218 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 XPO1O14980 1071 aaKnown RBP1.83□□□□□ -2.12
CCDC38-204ENST00000546816 ARPC3O15145 178 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 RHOBTB1O94844 696 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 DIRAS1O95057 198 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 VAMP5O95183 116 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 OPN1MWP04001 364 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 HEXBP07686 556 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 OPN1MW2P0DN77 364 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 OPN1MW3P0DN78 364 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 DBTP11182 482 aaKnown RBP1.83□□□□□ -2.12
CCDC38-204ENST00000546816 RPA2P15927 270 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 GDI1P31150 447 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 CCR1P32246 355 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 SOX6P35712 828 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 FDFT1P37268 417 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 NPBWR2P48146 333 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 UGT2B15P54855 530 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 CACNG7P62955 275 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 SPIBQ01892 262 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 ARHGAP19Q14CB8 494 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 STK11Q15831 433 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 ZBED5Q49AG3 693 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 FBXW9Q5XUX1 488 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 LCN12Q6JVE5 192 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 PIANPQ8IYJ0 282 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 OR52H1Q8NGJ2 320 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 LRRC58Q96CX6 371 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 DNAJC19Q96DA6 116 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 COQ2Q96H96 371 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 C16orf45Q96MC5 204 aaPredicted RBP1.83□□□□□ -2.12
CCDC38-204ENST00000546816 OSBPL10Q9BXB5 764 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 SPNS1Q9H2V7 528 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 YY1AP1Q9H869 796 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 RFNGQ9Y644 331 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 TMEM14AQ9Y6G1 99 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 PTPRTO14522 1441 aa1.83□□□□□ -2.12
CCDC38-204ENST00000546816 ATP10AO60312 1499 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 FCGBPQ9Y6R7 5405 aaPredicted RBP1.82□□□□□ -2.12
CCDC38-204ENST00000546816 TRAV39A0A0B4J263 110 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 A0A0B4J2A0 478 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 IGHV1-8P0DP01 117 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 NPY1RP25929 384 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 HSD17B2P37059 387 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 NAMPTP43490 491 aa1.82□□□□□ -2.12
CCDC38-204ENST00000546816 GPR6P46095 362 aaPredicted RBP1.82□□□□□ -2.12
CCDC38-204ENST00000546816 CCR8P51685 355 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms