RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ADRA2CP18825 462 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 PTNP21246 168 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 ARNTP27540 789 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 PJVKQ0ZLH3 352 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 FAM209AQ5JX71 171 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 TMEM31Q5JXX7 168 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 C1orf94Q6P1W5 598 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 TIPARPQ7Z3E1 657 aaKnown RBP11.84□□□□□ -0.51
PTCH1-212ENST00000546744 LNX2Q8N448 690 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 AKR7LQ8NHP1 331 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 SMIM19Q96E16 107 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 ZNF681Q96N22 645 aa11.84□□□□□ -0.51
PTCH1-212ENST00000546744 USP36Q9P275 1121 aaKnown RBP11.84□□□□□ -0.51
PTCH1-212ENST00000546744 IFITM5A6NNB3 132 aa11.83□□□□□ -0.51
PTCH1-212ENST00000546744 M0R082 166 aa11.83□□□□□ -0.51
PTCH1-212ENST00000546744 SOCS7O14512 581 aa11.83□□□□□ -0.51
PTCH1-212ENST00000546744 CD14P08571 375 aa11.83□□□□□ -0.51
PTCH1-212ENST00000546744 ELNP15502 786 aa11.83□□□□□ -0.51
PTCH1-212ENST00000546744 RAB5AP20339 215 aa11.83□□□□□ -0.51
PTCH1-212ENST00000546744 FXYD4P59646 89 aa11.83□□□□□ -0.51
PTCH1-212ENST00000546744 SIM1P81133 766 aaPredicted RBP11.83□□□□□ -0.51
PTCH1-212ENST00000546744 FABP5Q01469 135 aa11.83□□□□□ -0.51
PTCH1-212ENST00000546744 SOWAHCQ53LP3 525 aaPredicted RBP11.83□□□□□ -0.51
PTCH1-212ENST00000546744 IER5LQ5T953 404 aa11.83□□□□□ -0.51
PTCH1-212ENST00000546744 SLC41A2Q96JW4 573 aa11.83□□□□□ -0.51
PTCH1-212ENST00000546744 TEAD3Q99594 435 aa11.83□□□□□ -0.51
PTCH1-212ENST00000546744 POFUT1Q9H488 388 aa11.83□□□□□ -0.51
PTCH1-212ENST00000546744 SLC17A5Q9NRA2 495 aa11.83□□□□□ -0.51
PTCH1-212ENST00000546744 ZNF275Q9NSD4 429 aaPredicted RBP11.83□□□□□ -0.51
PTCH1-212ENST00000546744 B3GALT5Q9Y2C3 310 aa11.83□□□□□ -0.51
PTCH1-212ENST00000546744 RHBDD3Q9Y3P4 386 aa11.83□□□□□ -0.51
PTCH1-212ENST00000546744 ZNF98A6NK75 572 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 VSTM5A8MXK1 200 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 FRS3O43559 492 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 OR8G3PP0DMU2 310 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 RPL34P49207 117 aaKnown RBP11.83□□□□□ -0.52
PTCH1-212ENST00000546744 EPHA4P54764 986 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 LCN6P62502 163 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 ENDOGQ14249 297 aaKnown RBP11.83□□□□□ -0.52
PTCH1-212ENST00000546744 P4HA3Q7Z4N8 544 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 OR9A4Q8NGU2 314 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 TMED6Q8WW62 240 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 C22orf15Q8WYQ4 148 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 SAT2Q96F10 170 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-212ENST00000546744 ATF6BQ99941 703 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 RNF167Q9H6Y7 350 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 FN3KRPQ9HA64 309 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 FBXL12Q9NXK8 326 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 MBLAC1A4D2B0 266 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-212ENST00000546744 TOX4O94842 621 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 SPP1P10451 314 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 C6P13671 934 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 ERVK-16P61578 105 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 BTLAQ7Z6A9 289 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 GABRG1Q8N1C3 465 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 RSPRY1Q96DX4 576 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 HIPK2Q9H2X6 1198 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 SPATA6Q9NWH7 488 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-212ENST00000546744 NCDNQ9UBB6 729 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 FEZF1A0PJY2 475 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 GJE1A6NN92 205 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 E5RGE8 158 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 ITGBL1O95965 494 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-212ENST00000546744 HPNP05981 417 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 CTSLP07711 333 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 ZNF43P17038 809 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 ITGB7P26010 798 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 TEAD1P28347 426 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 IQCJQ1A5X6 159 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 TMEM201Q5SNT2 666 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 FIGLAQ6QHK4 219 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 OR13C2Q8NGS9 318 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 OR6K3Q8NGY3 331 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 SEH1LQ96EE3 360 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 C11orf84Q9BUA3 381 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-212ENST00000546744 CXorf36Q9H7Y0 433 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 NSG2Q9Y328 171 aa11.83□□□□□ -0.52
PTCH1-212ENST00000546744 IGLV3-10A0A075B6K4 115 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 ELOA3CA0A087WX78 387 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-212ENST00000546744 SOCS6O14544 535 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 ACHEP22303 614 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 WASP42768 502 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 PRDX1Q06830 199 aaKnown RBP11.82□□□□□ -0.52
PTCH1-212ENST00000546744 HSF5Q4G112 596 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-212ENST00000546744 SMUG1Q53HV7 270 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 MEX3BQ6ZN04 569 aaKnown RBP11.82□□□□□ -0.52
PTCH1-212ENST00000546744 GKN2Q86XP6 184 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 VRK2Q86Y07 508 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 BAGE3Q86Y29 109 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 BAGE2Q86Y30 109 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 PPP1R35Q8TAP8 253 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 MMABQ96EY8 250 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-212ENST00000546744 RNF208Q9H0X6 261 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 UBQLN4Q9NRR5 601 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 DUSP22Q9NRW4 184 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 CSAG2Q9Y5P2 127 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 TRAV27A0A087WT01 109 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 ARRB2P32121 409 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 SRP9P49458 86 aaKnown RBP11.82□□□□□ -0.52
PTCH1-212ENST00000546744 MOGAT2Q3SYC2 334 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms