RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 EPHA4P54764 986 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 BTG2P78543 158 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 SLC22A6Q4U2R8 563 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 CLLU1Q5K131 121 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 TTLL10Q6ZVT0 673 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 VN1R4Q7Z5H5 301 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 SMIM4Q8WVI0 70 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 ALG12Q9BV10 488 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 PELI2Q9HAT8 420 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 IFT46Q9NQC8 304 aa13.39□□□□□ -0.27
HOXC11-202ENST00000546378 FADS1O60427 444 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 KLF8O95600 359 aaPredicted RBP13.38□□□□□ -0.27
HOXC11-202ENST00000546378 ENPP2Q13822 863 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 KLF9Q13886 244 aaPredicted RBP13.38□□□□□ -0.27
HOXC11-202ENST00000546378 CST6Q15828 149 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 C1QL3Q5VWW1 255 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 OR52W1Q6IF63 320 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 NPRL2Q8WTW4 380 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 SLC25A38Q96DW6 304 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 KLHDC3Q9BQ90 382 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 OR8D2Q9GZM6 311 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 PNO1Q9NRX1 252 aaKnown RBP13.38□□□□□ -0.27
HOXC11-202ENST00000546378 RXFP3Q9NSD7 469 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 HRASLS2Q9NWW9 162 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 DOCK8Q8NF50 2099 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 LINC00862A6NCI5 91 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 MCRIP1C9JLW8 97 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 EFNB1P98172 346 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 UBXN2BQ14CS0 331 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 CDCP2Q5VXM1 449 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 FAM180AQ6UWF9 173 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 ZNF619Q8N2I2 560 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 SMIM19Q96E16 107 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 ARHGDIGQ99819 225 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 POFUT1Q9H488 388 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 BCL2L10Q9HD36 194 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 MKKSQ9NPJ1 570 aaPredicted RBP13.38□□□□□ -0.27
HOXC11-202ENST00000546378 FAM86C1Q9NVL1 165 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 CAMK2AQ9UQM7 478 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 KCNMB2Q9Y691 235 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 GVINP1Q7Z2Y8 2422 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 OBSL1O75147 1896 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 AHCTF1Q8WYP5 2266 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 C7orf66A4D0T2 115 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 TMEM235A6NFC5 223 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 PLPP2O43688 288 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 HLA-DQB1P01920 261 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 HOXB2P14652 356 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 NUDT1P36639 197 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 GK2Q14410 553 aaPredicted RBP13.38□□□□□ -0.27
HOXC11-202ENST00000546378 ETFDHQ16134 617 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 CDNFQ49AH0 187 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 KLHL26Q53HC5 615 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 SLC51BQ86UW2 128 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 EVA1AQ9H8M9 152 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 COMMD9Q9P000 198 aa13.38□□□□□ -0.27
HOXC11-202ENST00000546378 THAP10Q9P2Z0 257 aaPredicted RBP13.38□□□□□ -0.27
HOXC11-202ENST00000546378 A0A0B4J2A0 478 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 H0YGG7 62 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 POU3F4P49335 361 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 GMFBP60983 142 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 ARF3P61204 181 aaPredicted RBP13.37□□□□□ -0.27
HOXC11-202ENST00000546378 TNFRSF17Q02223 184 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 GLT8D1Q68CQ7 371 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 FAM122CQ6P4D5 195 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 TSSK4Q6SA08 328 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 LINC00346Q8IVM7 164 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 PCBD2Q9H0N5 130 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 SHPKQ9UHJ6 478 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 PHF11Q9UIL8 331 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 GPR34Q9UPC5 381 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 ERVK-19Q9WJR5 959 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 EXOGQ9Y2C4 368 aaKnown RBP13.37□□□□□ -0.27
HOXC11-202ENST00000546378 TMEM200CA6NKL6 621 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 ITGA10O75578 1167 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 PPP3CBP16298 524 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 PRKAR1BP31321 381 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 UBE2NLQ5JXB2 153 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 CORO6Q6QEF8 472 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 CBLN3Q6UW01 205 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 CMIPQ8IY22 773 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 MAFIPQ8WZ33 124 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 FAM3CQ92520 227 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 WDR34Q96EX3 536 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 MOGAT1Q96PD6 335 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 S1PR5Q9H228 398 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 COL6A3P12111 3177 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 NID1P14543 1247 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 SPI1P17947 270 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 MMP15P51511 669 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 FBXW4P57775 412 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 PPP2CBP62714 309 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 UBE2IP63279 158 aaKnown RBP13.37□□□□□ -0.27
HOXC11-202ENST00000546378 PPP2CAP67775 309 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 SCRN3Q0VDG4 424 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 BAMBIQ13145 260 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 HAGHLQ6PII5 290 aaPredicted RBP13.37□□□□□ -0.27
HOXC11-202ENST00000546378 NRSN1Q8IZ57 195 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 OR10R2Q8NGX6 335 aa13.37□□□□□ -0.27
HOXC11-202ENST00000546378 C7orf50Q9BRJ6 194 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms