RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 FUT1P19526 365 aa10.38□□□□□ -0.75
YBX3-217ENST00000546164 ZNF83P51522 516 aa10.38□□□□□ -0.75
YBX3-217ENST00000546164 TRAM2Q15035 370 aa10.38□□□□□ -0.75
YBX3-217ENST00000546164 CEACAM16Q2WEN9 425 aa10.38□□□□□ -0.75
YBX3-217ENST00000546164 C3orf36Q3SXR2 165 aa10.38□□□□□ -0.75
YBX3-217ENST00000546164 SLC35D2Q76EJ3 337 aa10.38□□□□□ -0.75
YBX3-217ENST00000546164 TSEN54Q7Z6J9 526 aaKnown RBP10.38□□□□□ -0.75
YBX3-217ENST00000546164 WDFY1Q8IWB7 410 aa10.38□□□□□ -0.75
YBX3-217ENST00000546164 CCDC36Q8IYA8 594 aa10.38□□□□□ -0.75
YBX3-217ENST00000546164 RNF113BQ8IZP6 322 aaKnown RBP10.38□□□□□ -0.75
YBX3-217ENST00000546164 RNF148Q8N7C7 305 aa10.38□□□□□ -0.75
YBX3-217ENST00000546164 FBXW5Q969U6 566 aa10.38□□□□□ -0.75
YBX3-217ENST00000546164 CDRT15Q96T59 188 aa10.38□□□□□ -0.75
YBX3-217ENST00000546164 EMC6Q9BV81 110 aa10.38□□□□□ -0.75
YBX3-217ENST00000546164 FNDC11Q9BVV2 318 aa10.38□□□□□ -0.75
YBX3-217ENST00000546164 B3GAT2Q9NPZ5 323 aa10.38□□□□□ -0.75
YBX3-217ENST00000546164 CRNNQ9UBG3 495 aaPredicted RBP10.38□□□□□ -0.75
YBX3-217ENST00000546164 ADAM21Q9UKJ8 722 aa10.38□□□□□ -0.75
YBX3-217ENST00000546164 DSCAMO60469 2012 aa10.38□□□□□ -0.75
YBX3-217ENST00000546164 ZNF99A8MXY4 864 aaPredicted RBP10.37□□□□□ -0.75
YBX3-217ENST00000546164 CENPBD1B2RD01 187 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 C11orf98E9PRG8 122 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 J3KTA2 159 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 M0R1B8 84 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 M0R3G1 203 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 RNF13O43567 381 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 SMPD2O60906 423 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 FUT4P22083 530 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 YAP1P46937 504 aaKnown RBP10.37□□□□□ -0.75
YBX3-217ENST00000546164 CSNK1A1P48729 337 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 BIDP55957 195 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 UBE2NP61088 152 aaKnown RBP10.37□□□□□ -0.75
YBX3-217ENST00000546164 RPS4XP62701 263 aaKnown RBP10.37□□□□□ -0.75
YBX3-217ENST00000546164 ARF1P84077 181 aaKnown RBP10.37□□□□□ -0.75
YBX3-217ENST00000546164 PRKCDQ05655 676 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 RPL18Q07020 188 aaKnown RBP10.37□□□□□ -0.75
YBX3-217ENST00000546164 ANKDD1AQ495B1 522 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 PHYHD1Q5SRE7 291 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 CYP4Z1Q86W10 505 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 KRTAP1-3Q8IUG1 177 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 NRMQ8IXM6 262 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 DEFB107AQ8IZN7 70 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 ARHGAP24Q8N264 748 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 FAM156AQ8NDB6 213 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 RBM15BQ8NDT2 890 aaKnown RBP10.37□□□□□ -0.75
YBX3-217ENST00000546164 TMEM171Q8WVE6 324 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 ACOT11Q8WXI4 607 aaPredicted RBP10.37□□□□□ -0.75
YBX3-217ENST00000546164 NEUROG1Q92886 237 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 TMEM54Q969K7 222 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 ZNF837Q96EG3 531 aaPredicted RBP10.37□□□□□ -0.75
YBX3-217ENST00000546164 SLC25A44Q96H78 314 aaPredicted RBP10.37□□□□□ -0.75
YBX3-217ENST00000546164 NSL1Q96IY1 281 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 C7orf34Q96L11 122 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 SEPHS2Q99611 448 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 GSX2Q9BZM3 304 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 GRIP2Q9C0E4 1043 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 NMNAT1Q9HAN9 279 aaPredicted RBP10.37□□□□□ -0.75
YBX3-217ENST00000546164 ZNF701Q9NV72 531 aaPredicted RBP10.37□□□□□ -0.75
YBX3-217ENST00000546164 NDUFAF4Q9P032 175 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 HIF3AQ9Y2N7 669 aa10.37□□□□□ -0.75
YBX3-217ENST00000546164 A0A087WUU8 490 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 A0A1W2PRQ8 180 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 BLOC1S5-TXNDC5H3BN57 136 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 PIP5K1CO60331 668 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 SERPINI2O75830 405 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 BCL10O95999 233 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 IGKV3-15P01624 115 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 IGLV1-44P01699 117 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 SEMG1P04279 462 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 RHCEP18577 417 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 TCN1P20061 433 aaPredicted RBP10.36□□□□□ -0.75
YBX3-217ENST00000546164 CALB2P22676 271 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 DAP3P51398 398 aaKnown RBP10.36□□□□□ -0.75
YBX3-217ENST00000546164 CDH11P55287 796 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 ADAM8P78325 824 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 CAMK2DQ13557 499 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 DGCR6Q14129 220 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 PGGHGQ32M88 737 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 IQCCQ4KMZ1 466 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 SHEQ5VZ18 495 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 CARD17Q5XLA6 110 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 PRSS57Q6UWY2 283 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 MBOAT2Q6ZWT7 520 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 HDDC2Q7Z4H3 204 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 DTX2Q86UW9 622 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 TGIF2LYQ8IUE0 185 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 FAM86B1Q8N7N1 296 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 OR6N1Q8NGY5 312 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 SMAP2Q8WU79 429 aaPredicted RBP10.36□□□□□ -0.75
YBX3-217ENST00000546164 ZNF566Q969W8 418 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 BPIFA2Q96DR5 249 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 PYURFQ96I23 114 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 DHRS1Q96LJ7 313 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 NSMCE2Q96MF7 247 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 C1QTNF6Q9BXI9 259 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 ULBP2Q9BZM5 246 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 CXorf56Q9H5V9 222 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 CISD1Q9NZ45 108 aaKnown RBP10.36□□□□□ -0.75
YBX3-217ENST00000546164 GLTPQ9NZD2 209 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 STX18Q9P2W9 335 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms