RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	PIN1	Q13526	163 aa	Predicted RBP	11.66	□□□□□ -0.54
POLE-222	ENST00000545015	SWI5	Q1ZZU3	235 aa		11.66	□□□□□ -0.54
POLE-222	ENST00000545015	CLEC9A	Q6UXN8	241 aa		11.66	□□□□□ -0.54
POLE-222	ENST00000545015	NKAIN4	Q8IVV8	208 aa		11.66	□□□□□ -0.54
POLE-222	ENST00000545015	IL17RD	Q8NFM7	739 aa		11.66	□□□□□ -0.54
POLE-222	ENST00000545015	CMTM5	Q96DZ9	223 aa		11.66	□□□□□ -0.54
POLE-222	ENST00000545015	PRRC1	Q96M27	445 aa		11.66	□□□□□ -0.54
POLE-222	ENST00000545015	SEPHS2	Q99611	448 aa		11.66	□□□□□ -0.54
POLE-222	ENST00000545015	SMR3A	Q99954	134 aa		11.66	□□□□□ -0.54
POLE-222	ENST00000545015	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.66	□□□□□ -0.54
POLE-222	ENST00000545015	ABCD2	Q9UBJ2	740 aa		11.66	□□□□□ -0.54
POLE-222	ENST00000545015	MOK	Q9UQ07	419 aa		11.66	□□□□□ -0.54
POLE-222	ENST00000545015	ATP23	Q9Y6H3	246 aa		11.66	□□□□□ -0.54
POLE-222	ENST00000545015	NIPBL	Q6KC79	2804 aa	eCLIP	11.66	□□□□□ -0.54
POLE-222	ENST00000545015	ALPK2	Q86TB3	2170 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	ZNF503-AS2	A6NEH8	195 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	NPIPB13	A6NJU9	1138 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	NPIPB4	C9JG80	1138 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	NME4	O00746	187 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	SNX3	O60493	162 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	OR7A10	O76100	309 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	HIST1H2AB	P04908	130 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	BMP4	P12644	408 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	IFNGR1	P15260	489 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	OR1E2	P47887	323 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	UGT2B15	P54855	530 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	TAS2R41	P59536	307 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	LIPE	Q05469	1076 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	MST1L	Q2TV78	715 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	LRRC23	Q53EV4	343 aa	Predicted RBP	11.65	□□□□□ -0.54
POLE-222	ENST00000545015	DEF8	Q6ZN54	512 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	CBLL1	Q75N03	491 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	SLC35D2	Q76EJ3	337 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	HIST3H2A	Q7L7L0	130 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	LRRC17	Q8N6Y2	441 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	NUP37	Q8NFH4	326 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	OR4F15	Q8NGB8	312 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	TMEM255B	Q8WV15	326 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	TMEM239	Q8WW34	195 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	LZIC	Q8WZA0	190 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	HIST1H2AC	Q93077	130 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	SLC25A44	Q96H78	314 aa	Predicted RBP	11.65	□□□□□ -0.54
POLE-222	ENST00000545015	ZNF75A	Q96N20	296 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	ELAC2	Q9BQ52	826 aa	Known RBP	11.65	□□□□□ -0.54
POLE-222	ENST00000545015	CACNG6	Q9BXT2	260 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	ULBP2	Q9BZM5	246 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	A4GNT	Q9UNA3	340 aa		11.65	□□□□□ -0.54
POLE-222	ENST00000545015	NSD1	Q96L73	2696 aa	Predicted RBP	11.65	□□□□□ -0.54
POLE-222	ENST00000545015	C11orf98	E9PRG8	122 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	CXCR6	O00574	342 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	KPNA4	O00629	521 aa	Predicted RBP	11.64	□□□□□ -0.55
POLE-222	ENST00000545015	RNF13	O43567	381 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	NDUFS7	O75251	213 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	LY6G6D	O95868	133 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	DRD4	P21917	467 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	ACVR1B	P36896	505 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	CSNK1A1	P48729	337 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	GSK3B	P49841	420 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	SLC7A2	P52569	658 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	ZNF133	P52736	654 aa	Predicted RBP	11.64	□□□□□ -0.55
POLE-222	ENST00000545015	SEC24C	P53992	1094 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	BID	P55957	195 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	DSCR9	P59020	149 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	TUBA1B	P68363	451 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	TUBA4A	P68366	448 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	CHRNB3	Q05901	458 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	ST3GAL3	Q11203	375 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	CAMK2D	Q13557	499 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	EFNB3	Q15768	340 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	HIST3H3	Q16695	136 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	NRN1L	Q496H8	165 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	CARD17	Q5XLA6	110 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	TUBA1A	Q71U36	451 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	PIWIL3	Q7Z3Z3	882 aa	Known RBP	11.64	□□□□□ -0.55
POLE-222	ENST00000545015	NANOGNB	Q7Z5D8	188 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	OFCC1	Q8IZS5	231 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	OR10H5	Q8NGA6	315 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	OR6N1	Q8NGY5	312 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	PFN4	Q8NHR9	129 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	SGTB	Q96EQ0	304 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	FOXB1	Q99853	325 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	KCNS3	Q9BQ31	491 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	MRPL13	Q9BYD1	178 aa	Known RBP	11.64	□□□□□ -0.55
POLE-222	ENST00000545015	ZNF442	Q9H7R0	627 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	CA10	Q9NS85	328 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	C20orf141	Q9NUB4	165 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	GLTP	Q9NZD2	209 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	ZNF224	Q9NZL3	707 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	GDF2	Q9UK05	429 aa	Predicted RBP	11.64	□□□□□ -0.55
POLE-222	ENST00000545015	FBXO9	Q9UK97	447 aa	Predicted RBP	11.64	□□□□□ -0.55
POLE-222	ENST00000545015	POFUT2	Q9Y2G5	429 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	MED31	Q9Y3C7	131 aa		11.64	□□□□□ -0.55
POLE-222	ENST00000545015	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.63	□□□□□ -0.55
POLE-222	ENST00000545015	MGRN1	O60291	552 aa		11.63	□□□□□ -0.55
POLE-222	ENST00000545015	ENTPD5	O75356	428 aa		11.63	□□□□□ -0.55
POLE-222	ENST00000545015	BCL10	O95999	233 aa		11.63	□□□□□ -0.55
POLE-222	ENST00000545015	PGA4	P0DJD7	388 aa		11.63	□□□□□ -0.55
POLE-222	ENST00000545015	PGA3	P0DJD8	388 aa		11.63	□□□□□ -0.55
POLE-222	ENST00000545015	UMPS	P11172	480 aa		11.63	□□□□□ -0.55
POLE-222	ENST00000545015	FUT1	P19526	365 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms