RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 RPL18Q07020 188 aaKnown RBP13.74□□□□□ -0.21
CCDC78-216ENST00000544996 KRT72Q14CN4 511 aa13.74□□□□□ -0.21
CCDC78-216ENST00000544996 HDDC2Q7Z4H3 204 aa13.74□□□□□ -0.21
CCDC78-216ENST00000544996 LIPHQ8WWY8 451 aa13.74□□□□□ -0.21
CCDC78-216ENST00000544996 IGFBPL1Q8WX77 278 aa13.74□□□□□ -0.21
CCDC78-216ENST00000544996 ZNF566Q969W8 418 aa13.74□□□□□ -0.21
CCDC78-216ENST00000544996 GTPBP3Q969Y2 492 aaKnown RBP13.74□□□□□ -0.21
CCDC78-216ENST00000544996 BPIFA2Q96DR5 249 aa13.74□□□□□ -0.21
CCDC78-216ENST00000544996 SLC25A44Q96H78 314 aaPredicted RBP13.74□□□□□ -0.21
CCDC78-216ENST00000544996 CDRT15Q96T59 188 aa13.74□□□□□ -0.21
CCDC78-216ENST00000544996 KCNS3Q9BQ31 491 aa13.74□□□□□ -0.21
CCDC78-216ENST00000544996 GSX2Q9BZM3 304 aa13.74□□□□□ -0.21
CCDC78-216ENST00000544996 GORASP2Q9H8Y8 452 aa13.74□□□□□ -0.21
CCDC78-216ENST00000544996 DCAF13Q9NV06 445 aaKnown RBP13.74□□□□□ -0.21
CCDC78-216ENST00000544996 MAGEL2Q9UJ55 1249 aa13.74□□□□□ -0.21
CCDC78-216ENST00000544996 MCIDASD6RGH6 385 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 J3KTA2 159 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 SOD3P08294 240 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 IFI30P13284 250 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 PAX1P15863 534 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 CAPZA2P47755 286 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 PTH2RP49190 550 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 DAP3P51398 398 aaKnown RBP13.73□□□□□ -0.21
CCDC78-216ENST00000544996 SPOCK1Q08629 439 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 SPATS1Q496A3 300 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 Q5PR19 223 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 PHYHD1Q5SRE7 291 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 AGAP6Q5VW22 663 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 PRSS57Q6UWY2 283 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 ZNF730Q6ZMV8 503 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 RRM2BQ7LG56 351 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 CDK20Q8IZL9 346 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 RNF113BQ8IZP6 322 aaKnown RBP13.73□□□□□ -0.21
CCDC78-216ENST00000544996 FITM2Q8N6M3 262 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 FAM169BQ8N8A8 192 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 FAM156AQ8NDB6 213 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 WFDC11Q8NEX6 87 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 ZNF837Q96EG3 531 aaPredicted RBP13.73□□□□□ -0.21
CCDC78-216ENST00000544996 TRMT61AQ96FX7 289 aaKnown RBP13.73□□□□□ -0.21
CCDC78-216ENST00000544996 SLC38A2Q96QD8 506 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 DHRS9Q9BPW9 319 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 TMUB1Q9BVT8 246 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 INIPQ9NRY2 104 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 ZNF701Q9NV72 531 aaPredicted RBP13.73□□□□□ -0.21
CCDC78-216ENST00000544996 STX18Q9P2W9 335 aaKnown RBP13.73□□□□□ -0.21
CCDC78-216ENST00000544996 ENPP4Q9Y6X5 453 aa13.73□□□□□ -0.21
CCDC78-216ENST00000544996 AKAP9Q99996 3911 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 E7EQL1 145 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 FFAR1O14842 300 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 PIP5K1CO60331 668 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 ENTPD5O75356 428 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 IGHG1P01857 330 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 CRYAAP02489 173 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 F13BP05160 661 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 SAGP10523 405 aaPredicted RBP13.72□□□□□ -0.21
CCDC78-216ENST00000544996 AQP2P41181 271 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 ATP5J2P56134 94 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 TUBA1BP68363 451 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 TUBA4AP68366 448 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 PGGHGQ32M88 737 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 C3orf36Q3SXR2 165 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 TUBA1AQ71U36 451 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 NRMQ8IXM6 262 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 DEFB107AQ8IZN7 70 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 FBXL14Q8N1E6 418 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 ACOT11Q8WXI4 607 aaPredicted RBP13.72□□□□□ -0.21
CCDC78-216ENST00000544996 TMEM54Q969K7 222 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 NSL1Q96IY1 281 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 NELFAQ9H3P2 528 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 ANKRD19PQ9H560 264 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 NMNAT1Q9HAN9 279 aaPredicted RBP13.72□□□□□ -0.21
CCDC78-216ENST00000544996 MAN2C1Q9NTJ4 1040 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 GLTPQ9NZD2 209 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 CRNNQ9UBG3 495 aaPredicted RBP13.72□□□□□ -0.21
CCDC78-216ENST00000544996 ATP23Q9Y6H3 246 aa13.72□□□□□ -0.21
CCDC78-216ENST00000544996 PRRC2AP48634 2157 aaKnown RBP13.72□□□□□ -0.21
CCDC78-216ENST00000544996 IGHV1-18A0A0C4DH31 117 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 SEC14L2O76054 403 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 CBR1P16152 277 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 ITGA2P17301 1181 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 RHCEP18577 417 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 ARR3P36575 388 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 FABP6P51161 128 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 CLRN1P58418 232 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 PRKCDQ05655 676 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 MELKQ14680 651 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 FXNQ16595 210 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 ALG10Q5BKT4 473 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 ZNF544Q6NX49 715 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 ZNF813Q6ZN06 617 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 MBOAT2Q6ZWT7 520 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 ZNF627Q7L945 461 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 YTHDF3Q7Z739 585 aaKnown RBP13.71□□□□□ -0.21
CCDC78-216ENST00000544996 RBM15BQ8NDT2 890 aaKnown RBP13.71□□□□□ -0.21
CCDC78-216ENST00000544996 NANOS1Q8WY41 292 aaKnown RBP13.71□□□□□ -0.21
CCDC78-216ENST00000544996 MCUR1Q96AQ8 359 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 NSMCE2Q96MF7 247 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 FOXB1Q99853 325 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 KATNB1Q9BVA0 655 aa13.71□□□□□ -0.21
CCDC78-216ENST00000544996 GRIP2Q9C0E4 1043 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms