RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 OR4D11Q8NGI4 311 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 HIST1H2ACQ93077 130 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 SLC41A3Q96GZ6 507 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 TPD52L3Q96J77 140 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 MUS81Q96NY9 551 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 LRRC37BQ96QE4 947 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 SLC19A3Q9BZV2 496 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 UBTD1Q9HAC8 227 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 SLC7A10Q9NS82 523 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 BEX4Q9NWD9 120 aaPredicted RBP6.48□□□□□ -1.37
CPSF7-224ENST00000544990 CMTM6Q9NX76 183 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 MRPL39Q9NYK5 338 aaKnown RBP6.48□□□□□ -1.37
CPSF7-224ENST00000544990 SLC7A7Q9UM01 511 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 USP22Q9UPT9 525 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 RCE1Q9Y256 329 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 ARL2BPQ9Y2Y0 163 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 RNF115Q9Y4L5 304 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 MAGED1Q9Y5V3 778 aaPredicted RBP6.48□□□□□ -1.37
CPSF7-224ENST00000544990 SPG11Q96JI7 2443 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 FBN2P35556 2912 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 PDZD2O15018 2839 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 AKAP6Q13023 2319 aa6.48□□□□□ -1.37
CPSF7-224ENST00000544990 HEATR1Q9H583 2144 aaKnown RBP6.47□□□□□ -1.37
CPSF7-224ENST00000544990 PRR14LQ5THK1 2151 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 MS4A18H0YCH9 400 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 PDLIM1O00151 329 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 CXCR6O00574 342 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 CLOCKO15516 846 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 SLC43A1O75387 559 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 OR5F1O95221 314 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 ITGA5P08648 1049 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 ADORA3P0DMS8 318 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 THRBP10828 461 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 CD53P19397 219 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 FUT4P22083 530 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 AHCYP23526 432 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 LOXP28300 417 aaPredicted RBP6.47□□□□□ -1.37
CPSF7-224ENST00000544990 OR1E2P47887 323 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 SELENOPP49908 381 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 CRYBA2P53672 197 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 PRPS1P60891 318 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 PSME3P61289 254 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 LTBQ06643 244 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 PUDPQ08623 228 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 ST3GAL3Q11203 375 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 MS4A18Q3C1V0 323 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 C9orf135Q5VTT2 229 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 HMBOX1Q6NT76 420 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 C8orf82Q6P1X6 216 aaPredicted RBP6.47□□□□□ -1.37
CPSF7-224ENST00000544990 TMEM108Q6UXF1 575 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 FKBP9P1Q75LS8 142 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 PIGWQ7Z7B1 504 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 GPR137CQ8N3F9 429 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 PIK3C3Q8NEB9 887 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 OR5J2Q8NH18 312 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 OR52N5Q8NH56 324 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 RADILQ96JH8 1075 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 HS6ST2Q96MM7 605 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 CCL19Q99731 98 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 PIP5K1AQ99755 562 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 KCTD14Q9BQ13 255 aaPredicted RBP6.47□□□□□ -1.37
CPSF7-224ENST00000544990 TMEM204Q9BSN7 226 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 LINC00470Q9BZP3 86 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 AMBRA1Q9C0C7 1298 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 CXXC4Q9H2H0 198 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 FKRPQ9H9S5 495 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 SPAG4Q9NPE6 437 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 B3GAT2Q9NPZ5 323 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 NANSQ9NR45 359 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 ADA2Q9NZK5 511 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 SEC14L4Q9UDX3 406 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 RIMS3Q9UJD0 308 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 MGAT4BQ9UQ53 548 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 AMDHD2Q9Y303 409 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 NOX1Q9Y5S8 564 aa6.47□□□□□ -1.37
CPSF7-224ENST00000544990 RAI1Q7Z5J4 1906 aaPredicted RBP6.46□□□□□ -1.37
CPSF7-224ENST00000544990 LRBAP50851 2863 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 HTR3EA5X5Y0 456 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 DPRXA6NFQ7 191 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 ZNF726A6NNF4 738 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 C22orf46C9J442 243 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 C11orf98E9PRG8 122 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 RPL36A-HNRNPH2H7BZ11 118 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 KPNA4O00629 521 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-224ENST00000544990 NME4O00746 187 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 PLPP3O14495 311 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 HS3ST1O14792 307 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 ARHGEF9O43307 516 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 SHOX2O60902 331 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-224ENST00000544990 SMPD2O60906 423 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 TMCC2O75069 709 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 ZNF432O94892 652 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 ZNF682O95780 498 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 CH25HO95992 272 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 PLAUP00749 431 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 MT-ND1P03886 318 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 THY1P04216 161 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 IFNW1P05000 195 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 UMPSP11172 480 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 CDH2P19022 906 aaPredicted RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms