RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	TCTE1	Q5JU00	501 aa		13.68	□□□□□ -0.22
CHFR-223	ENST00000544268	HEATR5A	Q86XA9	2040 aa		13.68	□□□□□ -0.22
CHFR-223	ENST00000544268	PLXDC1	Q8IUK5	500 aa		13.68	□□□□□ -0.22
CHFR-223	ENST00000544268	OR5J2	Q8NH18	312 aa		13.68	□□□□□ -0.22
CHFR-223	ENST00000544268	BRIX1	Q8TDN6	353 aa	Known RBP	13.68	□□□□□ -0.22
CHFR-223	ENST00000544268	MOGAT1	Q96PD6	335 aa		13.68	□□□□□ -0.22
CHFR-223	ENST00000544268	LMF1	Q96S06	567 aa		13.68	□□□□□ -0.22
CHFR-223	ENST00000544268	TEAD3	Q99594	435 aa		13.68	□□□□□ -0.22
CHFR-223	ENST00000544268	DUSP23	Q9BVJ7	150 aa		13.68	□□□□□ -0.22
CHFR-223	ENST00000544268	CACNG6	Q9BXT2	260 aa		13.68	□□□□□ -0.22
CHFR-223	ENST00000544268	ACTR6	Q9GZN1	396 aa		13.68	□□□□□ -0.22
CHFR-223	ENST00000544268		A0A0A6YYC8	382 aa	Predicted RBP	13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	LY6G6E	A0A0G2JKS1	128 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268		A0A1B0GWA3	101 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	DAPL1	A0PJW8	107 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	PQLC2L	A1A4F0	135 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	IRGM	A1A4Y4	181 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268		I3L1I5	382 aa	Predicted RBP	13.67	□□□□□ -0.22
CHFR-223	ENST00000544268		J3QLW9	94 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	BRINP1	O60477	761 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	APOC3	P02656	99 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	DBI	P07108	87 aa	Known RBP	13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	ADRB1	P08588	477 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	SP9	P0CG40	484 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	ZNF19	P17023	458 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	GIF	P27352	417 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	RBMS1	P29558	406 aa	Known RBP	13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	SELENOP	P49908	381 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	MEOX2	P50222	304 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	FHL1	Q13642	323 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	TRIM61	Q5EBN2	209 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	PDSS1	Q5T2R2	415 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	GUSBP11	Q6P575	273 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	SCARB1	Q8WTV0	552 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	ORAI1	Q96D31	301 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	C4orf36	Q96KX1	117 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	ZNF285	Q96NJ3	590 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	ZNF559	Q9BR84	538 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	NUDT22	Q9BRQ3	303 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	CACYBP	Q9HB71	228 aa	Known RBP	13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	BABAM2	Q9NXR7	383 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	PURG	Q9UJV8	347 aa	Known RBP	13.67	□□□□□ -0.22
CHFR-223	ENST00000544268	ZNF346	Q9UL40	294 aa	Known RBP	13.67	□□□□□ -0.22
CHFR-223	ENST00000544268		U3KQA8	63 aa		13.67	□□□□□ -0.22
CHFR-223	ENST00000544268		A0A087WV48	116 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	PLSCR5	A0PG75	271 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	CPED1	A4D0V7	1026 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268		H7C2Y5	167 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	THBS1	P07996	1170 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	H2AFB1	P0C5Y9	115 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	BMP7	P18075	431 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	SRP9	P49458	86 aa	Known RBP	13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	BTG2	P78543	158 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	SLC25A35	Q3KQZ1	300 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	RNASE12	Q5GAN4	147 aa	Known RBP	13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	EXOSC6	Q5RKV6	272 aa	Known RBP	13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	SEZ6L2	Q6UXD5	910 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	BTN2A1	Q7KYR7	527 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	OAF	Q86UD1	273 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	GPR135	Q8IZ08	494 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	CDRT4	Q8N9R6	151 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	SDR9C7	Q8NEX9	313 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	BEST4	Q8NFU0	473 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	OR52L1	Q8NGH7	329 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	OR52N1	Q8NH53	320 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	COQ8A	Q8NI60	647 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	TINAGL1	Q9GZM7	467 aa	Predicted RBP	13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	CHRNA10	Q9GZZ6	450 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	SPRTN	Q9H040	489 aa	Predicted RBP	13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	ADAM18	Q9Y3Q7	739 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	PCDHGA9	Q9Y5G4	932 aa	Known RBP	13.66	□□□□□ -0.22
CHFR-223	ENST00000544268		L7N2F9	121 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	FOXS1	O43638	330 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	EIF4E	P06730	217 aa	Known RBP	13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	CXCL2	P19875	107 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	MAP3K8	P41279	467 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	ZNF85	Q03923	595 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	NR0B2	Q15466	257 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	EIPR1	Q53HC9	387 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	JAZF1	Q86VZ6	243 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	LNX2	Q8N448	690 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	OR5W2	Q8NH69	310 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	ZPLD1	Q8TCW7	415 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	ZMYND19	Q96E35	227 aa	Predicted RBP	13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	DNAJA3	Q96EY1	480 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	DDO	Q99489	341 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	SMOC1	Q9H4F8	434 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	ADGRL4	Q9HBW9	690 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	DUSP22	Q9NRW4	184 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	MED17	Q9NVC6	651 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	NDRG3	Q9UGV2	375 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	GPR179	Q6PRD1	2367 aa		13.66	□□□□□ -0.22
CHFR-223	ENST00000544268	RAB19	A4D1S5	217 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	PRR23D1	E9PI22	279 aa	Predicted RBP	13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	PSMD9	O00233	223 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	POU3F2	P20265	443 aa	Predicted RBP	13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	S1PR1	P21453	382 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	FGL1	Q08830	312 aa		13.65	□□□□□ -0.22
CHFR-223	ENST00000544268	B3GNTL1	Q67FW5	361 aa	Predicted RBP	13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms