RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 TMEM231Q9H6L2 316 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 EMC7Q9NPA0 242 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 TAS2R5Q9NYW4 299 aa14.3□□□□□ -0.12
CHD4-210ENST00000544040 NXPH2O95156 264 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 C1SP09871 688 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 AOAHP28039 575 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 CTBSQ01459 385 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 HES1Q14469 280 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 BPIFCQ8NFQ6 507 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 RLN3Q8WXF3 142 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 PGAP3Q96FM1 320 aaPredicted RBP14.29□□□□□ -0.12
CHD4-210ENST00000544040 AMBRA1Q9C0C7 1298 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 B4GALT3O60512 393 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 ETV1P50549 477 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 PMPCAQ10713 525 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 DUSP6Q16828 381 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 ZNF718Q3SXZ3 478 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 TOR2AQ5JU69 321 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 CLEC14AQ86T13 490 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 ATOH8Q96SQ7 321 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 WDR83Q9BRX9 315 aaKnown RBP14.29□□□□□ -0.12
CHD4-210ENST00000544040 DHRS4Q9BTZ2 278 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 LRIT1Q9P2V4 623 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 ARL2-SNX15V9GYD0 113 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 PAPLNO95428 1278 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 OR2T7P0C7T2 308 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 CARD18P57730 90 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 RAB33AQ14088 237 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 AAED1Q7RTV5 226 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 SLC51BQ86UW2 128 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 WDR5BQ86VZ2 330 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 RASD2Q96D21 266 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 MUCL1Q96DR8 90 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 HEYLQ9NQ87 328 aaPredicted RBP14.29□□□□□ -0.12
CHD4-210ENST00000544040 RGRP47804 291 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 ZNF266Q14584 549 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 SSX7Q7RTT5 188 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 SLC35G3Q8N808 338 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 OR51A4Q8NGJ6 313 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 OR51A2Q8NGJ7 313 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 HRASLS5Q96KN8 279 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 CGGBP1Q9UFW8 167 aaPredicted RBP14.29□□□□□ -0.12
CHD4-210ENST00000544040 KIF1AQ12756 1690 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 H0YGG7 62 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 FOXE1O00358 373 aaPredicted RBP14.29□□□□□ -0.12
CHD4-210ENST00000544040 UBL3O95164 117 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 OR2C1O95371 312 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 CALCBP10092 127 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 TACR1P25103 407 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 FOXK2Q01167 660 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 ALKBH1Q13686 389 aaKnown RBP14.29□□□□□ -0.12
CHD4-210ENST00000544040 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.29□□□□□ -0.12
CHD4-210ENST00000544040 ZNF468Q5VIY5 522 aaPredicted RBP14.29□□□□□ -0.12
CHD4-210ENST00000544040 LYSMD2Q8IV50 215 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 LILRA2Q8N149 483 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 OR11L1Q8NGX0 322 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 ASB11Q8WXH4 323 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 INSM2Q96T92 566 aaPredicted RBP14.29□□□□□ -0.12
CHD4-210ENST00000544040 NECAP2Q9NVZ3 263 aa14.29□□□□□ -0.12
CHD4-210ENST00000544040 HS3ST1O14792 307 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 ADAM23O75077 832 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 NTF3P20783 257 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 ZNF93P35789 620 aaPredicted RBP14.28□□□□□ -0.12
CHD4-210ENST00000544040 SYT13Q7L8C5 426 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 FAM122BQ7Z309 247 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 SPRED1Q7Z699 444 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 KCNG3Q8TAE7 436 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 GPRIN2O60269 458 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 MFAP5Q13361 173 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 CRMP1Q14194 572 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 TAS1R1Q7RTX1 841 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 C1orf87Q8N0U7 546 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 OR51S1Q8NGJ8 323 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 FAM3DQ96BQ1 224 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 WIF1Q9Y5W5 379 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 NPFFR2Q9Y5X5 522 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 TFAP2AP05549 437 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 NAGAP17050 411 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 PDZK1IP1Q13113 114 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 HAGHQ16775 308 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 ADPRMQ3LIE5 342 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 YOD1Q5VVQ6 348 aaPredicted RBP14.28□□□□□ -0.12
CHD4-210ENST00000544040 H3F3CQ6NXT2 135 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 UQCC2Q9BRT2 126 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 BANF2Q9H503 90 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 FBXO8Q9NRD0 319 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 MED9Q9NWA0 146 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 OR52A1Q9UKL2 312 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 GRPP07492 148 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 ACKR3P25106 362 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 S100A7P31151 101 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 BMPR1AP36894 532 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 SLC46A3Q7Z3Q1 461 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 LKAAEAR1Q8TD35 194 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 KCTD12Q96CX2 325 aaKnown RBP14.28□□□□□ -0.12
CHD4-210ENST00000544040 FIZ1Q96SL8 496 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 PIGLQ9Y2B2 252 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 TGM1P22735 817 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 PRLHRP49683 370 aa14.28□□□□□ -0.12
CHD4-210ENST00000544040 C9orf152Q5JTZ5 239 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms