RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	TXNIP	Q9H3M7	391 aa		9.01	□□□□□ -0.97
CPSF7-221	ENST00000543545	PIGM	Q9H3S5	423 aa		9.01	□□□□□ -0.97
CPSF7-221	ENST00000543545	FANCF	Q9NPI8	374 aa		9.01	□□□□□ -0.97
CPSF7-221	ENST00000543545	IL20	Q9NYY1	176 aa		9.01	□□□□□ -0.97
CPSF7-221	ENST00000543545	REV1	Q9UBZ9	1251 aa		9.01	□□□□□ -0.97
CPSF7-221	ENST00000543545	RCE1	Q9Y256	329 aa		9.01	□□□□□ -0.97
CPSF7-221	ENST00000543545	ADAM18	Q9Y3Q7	739 aa		9.01	□□□□□ -0.97
CPSF7-221	ENST00000543545	ZGRF1	Q86YA3	2104 aa		9.01	□□□□□ -0.97
CPSF7-221	ENST00000543545	SHANK1	Q9Y566	2161 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	TEX13C	A0A0J9YWL9	993 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545		A6NIZ1	184 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545		M0R3G1	203 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	ARHGEF9	O43307	516 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	TNFSF13	O75888	250 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	IGHG1	P01857	330 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	ALPL	P05186	524 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	TSPAN19	P0C672	248 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	CSNK1A1	P48729	337 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	CRISP1	P54107	249 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	RAD23A	P54725	363 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	FXYD6P3	P58550	94 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	RAP1B	P61224	184 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	ESRRG	P62508	458 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	RAP1A	P62834	184 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	PPP2R2B	Q00005	443 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	MYBPC1	Q00872	1141 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	ESPL1	Q14674	2120 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	GINS1	Q14691	196 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	GUSBP1	Q15486	140 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	SLC35F1	Q5T1Q4	408 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	FAM205BP	Q63HN1	556 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	JAZF1	Q86VZ6	243 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	LIX1L	Q8IVB5	337 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	PARP8	Q8N3A8	854 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	GPR137C	Q8N3F9	429 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	IQCF1	Q8N6M8	205 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	ARIH2OS	Q8N7S6	290 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	ZNF610	Q8N9Z0	462 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	SYT14	Q8NB59	555 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	OR8D4	Q8NGM9	314 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	OR6X1	Q8NH79	312 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	ASB10	Q8WXI3	467 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	ZNF566	Q969W8	418 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	SLC25A44	Q96H78	314 aa	Predicted RBP	9	□□□□□ -0.97
CPSF7-221	ENST00000543545		Q96M85	177 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	TSPAN32	Q96QS1	320 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	RBP7	Q96R05	134 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	OR2M2	Q96R28	347 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	B3GAT2	Q9NPZ5	323 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	NRIP3	Q9NQ35	241 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	PLSCR4	Q9NRQ2	329 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	USE1	Q9NZ43	259 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	BAIAP2	Q9UQB8	552 aa		9	□□□□□ -0.97
CPSF7-221	ENST00000543545	SMG1	Q96Q15	3661 aa	Known RBP	9	□□□□□ -0.97
CPSF7-221	ENST00000543545	OR6C65	A6NJZ3	312 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	IMPA2	O14732	288 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	MSTN	O14793	375 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	CASQ2	O14958	399 aa	Predicted RBP	8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	IDH3B	O43837	385 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	UPK3A	O75631	287 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	TRMU	O75648	421 aa	Known RBP	8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	IFNG	P01579	166 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	IGHM	P01871	453 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	TP53	P04637	393 aa	Predicted RBP	8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	HMGN1	P05114	100 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	CD8B	P10966	210 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	APEH	P13798	732 aa	Known RBP	8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	ACADS	P16219	412 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	SDHA	P31040	664 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	NTF4	P34130	210 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	OR3A2	P47893	321 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	GIPR	P48546	466 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	RUNX1T1	Q06455	604 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	CD47	Q08722	323 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	FAP	Q12884	760 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	KRR1	Q13601	381 aa	Known RBP	8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	PGGHG	Q32M88	737 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	SLC25A35	Q3KQZ1	300 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	ARMC4	Q5T2S8	1044 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	TSPO2	Q5TGU0	170 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	TMEM236	Q5W0B7	351 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	SLC27A4	Q6P1M0	643 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	XKRX	Q6PP77	449 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	TFAP2E	Q6VUC0	442 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	NHLRC1	Q6VVB1	395 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	C20orf196	Q8IYI0	205 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	ZNF808	Q8N4W9	903 aa	Predicted RBP	8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	POMGNT2	Q8NAT1	580 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	OR52E2	Q8NGJ4	325 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	OR4K13	Q8NH42	304 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	LILRB4	Q8NHJ6	448 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	OTULIN	Q96BN8	352 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	RASD2	Q96D21	266 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	LRRC46	Q96FV0	321 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	PLEKHA8	Q96JA3	519 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	GPX7	Q96SL4	187 aa	Predicted RBP	8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	SLCO5A1	Q9H2Y9	848 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	VCX3B	Q9H321	246 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	RERGL	Q9H628	205 aa		8.99	□□□□□ -0.97
CPSF7-221	ENST00000543545	KCNJ16	Q9NPI9	418 aa		8.99	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms