RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 B3GAT2Q9NPZ5 323 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 NRIP3Q9NQ35 241 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 KIF17Q9P2E2 1029 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 MALT1Q9UDY8 824 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 POFUT2Q9Y2G5 429 aa10.79□□□□□ -0.68
DDX55-210ENST00000543016 SLC35F4A4IF30 521 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 EEF1E1-BLOC1S5C9J1V9 151 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 EEF1E1O43324 174 aaKnown RBP10.78□□□□□ -0.68
DDX55-210ENST00000543016 BAG2O95816 211 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 TXNDC12O95881 172 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 IGHG1P01857 330 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 F13BP05160 661 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 OSMP13725 252 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 HLA-DOBP13765 273 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 TGFBR3Q03167 851 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 SRSF1Q07955 248 aaKnown RBP eCLIP10.78□□□□□ -0.68
DDX55-210ENST00000543016 ACKR1Q16570 336 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 ARMC4Q5T2S8 1044 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 MEX3DQ86XN8 651 aaKnown RBP10.78□□□□□ -0.68
DDX55-210ENST00000543016 TMEM123Q8N131 208 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 ARIH2OSQ8N7S6 290 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 ZNF610Q8N9Z0 462 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 ZNF566Q969W8 418 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 GTPBP3Q969Y2 492 aaKnown RBP10.78□□□□□ -0.68
DDX55-210ENST00000543016 ZNF775Q96BV0 537 aaPredicted RBP10.78□□□□□ -0.68
DDX55-210ENST00000543016 OR2M2Q96R28 347 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 C9orf16Q9BUW7 83 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 ALG12Q9BV10 488 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 TEX12Q9BXU0 123 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 POLDIP3Q9BY77 421 aaKnown RBP10.78□□□□□ -0.68
DDX55-210ENST00000543016 OR10A4Q9H209 315 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 SEMA6AQ9H2E6 1030 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 C12orf49Q9H741 205 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 SLC24A3Q9HC58 644 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 PAPOLBQ9NRJ5 636 aaKnown RBP10.78□□□□□ -0.68
DDX55-210ENST00000543016 ASB6Q9NWX5 421 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 GRHPRQ9UBQ7 328 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 UPB1Q9UBR1 384 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 OAZ3Q9UMX2 235 aa10.78□□□□□ -0.68
DDX55-210ENST00000543016 UBR5O95071 2799 aaPredicted RBP10.77□□□□□ -0.68
DDX55-210ENST00000543016 LRRK2Q5S007 2527 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 RPL36A-HNRNPH2H7BZ11 118 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 MGRN1O60291 552 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 KRT33AO76009 404 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 POU2F1P14859 743 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 ANPEPP15144 967 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 ACADSP16219 412 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 CDH2P19022 906 aaPredicted RBP10.77□□□□□ -0.69
DDX55-210ENST00000543016 PRKACGP22612 351 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 PAX7P23759 505 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 SDHAP31040 664 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 NTF4P34130 210 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 CD79BP40259 229 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 SELENOPP49908 381 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 SH3BGRP55822 239 aaPredicted RBP10.77□□□□□ -0.69
DDX55-210ENST00000543016 BIDP55957 195 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 ESRRGP62508 458 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 SORDQ00796 357 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 RCN1Q15293 331 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 KDM4DQ6B0I6 523 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 ZNF474Q6S9Z5 364 aaPredicted RBP10.77□□□□□ -0.69
DDX55-210ENST00000543016 KLHL17Q6TDP4 642 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 ADCK1Q86TW2 530 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 C20orf196Q8IYI0 205 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 GABRG1Q8N1C3 465 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 GPR137CQ8N3F9 429 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 ICA1LQ8NDH6 482 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 TEX47Q8TBZ9 253 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 ASB10Q8WXI3 467 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 TXNDC15Q96J42 360 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 SNX18Q96RF0 628 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 NIPSNAP1Q9BPW8 284 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 KATNB1Q9BVA0 655 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 RBM24Q9BX46 236 aaKnown RBP10.77□□□□□ -0.69
DDX55-210ENST00000543016 OPN3Q9H1Y3 402 aaPredicted RBP10.77□□□□□ -0.69
DDX55-210ENST00000543016 SMURF2Q9HAU4 748 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 MED29Q9NX70 200 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 USE1Q9NZ43 259 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 GPR52Q9Y2T5 361 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 ALPK2Q86TB3 2170 aa10.77□□□□□ -0.69
DDX55-210ENST00000543016 USP9XQ93008 2570 aaPredicted RBP10.76□□□□□ -0.69
DDX55-210ENST00000543016 FAM90A27PA6NNH2 459 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 ZNF587BE7ETH6 402 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 XKRYO14609 159 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 SERPINI2O75830 405 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 PPP3CBP16298 524 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 ZNF26P17031 533 aaPredicted RBP10.76□□□□□ -0.69
DDX55-210ENST00000543016 PSMB1P20618 241 aaKnown RBP10.76□□□□□ -0.69
DDX55-210ENST00000543016 MPGP29372 298 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 NOS3P29474 1203 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 CSNK1A1P48729 337 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 DAPP51397 102 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 FXYD6P3P58550 94 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 ERVK-25P63136 954 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 PPP2R2BQ00005 443 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 ITGADQ13349 1161 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 RIPK1Q13546 671 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 THEM4Q5T1C6 240 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 TSPO2Q5TGU0 170 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 OR7E24Q6IFN5 339 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms