RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 BRINP1O60477 761 aa7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 GALR3O60755 368 aaPredicted RBP7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 TPOP07202 933 aa7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 OR1D4P47884 311 aa7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 ARRB1P49407 418 aaPredicted RBP7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 SEC61A1P61619 476 aaKnown RBP7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 TDGQ13569 410 aa7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 OR5M10Q6IEU7 315 aa7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 UBE3DQ7Z6J8 389 aa7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 PLXDC1Q8IUK5 500 aa7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 TMEM156Q8N614 296 aa7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 C19orf47Q8N9M1 422 aaKnown RBP7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 ACBD4Q8NC06 268 aa7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 OR5H2Q8NGV7 314 aa7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 OR10K1Q8NGX5 313 aa7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 SLC37A2Q8TED4 501 aa7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 DCUN1D4Q92564 292 aa7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 GCDHQ92947 438 aaPredicted RBP7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 PGAM5Q96HS1 289 aa7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 ACAD8Q9UKU7 415 aa7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 VDAC3Q9Y277 283 aa7.53□□□□□ -1.2
PRKAB1-207ENST00000542698 E9PI62 339 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 UBBP0CG47 229 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 UBCP0CG48 685 aaKnown RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 HOXB3P14651 431 aaPredicted RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 RAD52P43351 418 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 MC2RQ01718 297 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 C1QTNF12Q5T7M4 302 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 FAAP20Q6NZ36 180 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 THSD4Q6ZMP0 1018 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 OR2L13Q8N349 312 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 RCBTB1Q8NDN9 531 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 ARL11Q969Q4 196 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 PELI1Q96FA3 418 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 TOE1Q96GM8 510 aaKnown RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 TCTN2Q96GX1 697 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 COX14Q96I36 57 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 ZNF578Q96N58 590 aaPredicted RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 ELF4Q99607 663 aaPredicted RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 PRRG4Q9BZD6 226 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 TSPAN10Q9H1Z9 355 aaPredicted RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 C6orf106Q9H6K1 298 aaPredicted RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 C8orf33Q9H7E9 229 aaPredicted RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 PPP1R3EQ9H7J1 279 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 MRPS18AQ9NVS2 196 aaKnown RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 SLC17A4Q9Y2C5 497 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 LSM2Q9Y333 95 aaKnown RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 MAOAP21397 527 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 LIMS1P48059 325 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 RAG2P55895 527 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 GPNMBQ14956 572 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 NKAPLQ5M9Q1 402 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 PLPP7Q8NBV4 271 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 NAXEQ8NCW5 288 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 C17orf47Q8NEP4 570 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 ANGPTL6Q8NI99 470 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 ZC3HAV1LQ96H79 300 aaKnown RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 FAM71F1Q96KD3 344 aaPredicted RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 CDCA3Q99618 268 aaPredicted RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 DHRS9Q9BPW9 319 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 RNF32Q9H0A6 362 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 SLCO5A1Q9H2Y9 848 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 SEMA6CQ9H3T2 930 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 SDHAF2Q9NX18 166 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 FBXL4Q9UKA2 621 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 SCN4AP35499 1836 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 PLXNA1Q9UIW2 1896 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 LOC100289279A0A1B0GTE1 492 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 A0A1B0GUH1 482 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 FAM221BA6H8Z2 402 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 HCRTR1O43613 425 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 DUX1O43812 170 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 RAB3AP20336 220 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 DCTDP32321 178 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 RPS27P42677 84 aaKnown RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 DAP3P51398 398 aaKnown RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 CRYBA2P53672 197 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 IFITM2Q01629 132 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 OR7A5Q15622 319 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 MLF2Q15773 248 aaPredicted RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 TOR2AQ5JU69 321 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 FCRL6Q6DN72 434 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 SIGIRRQ6IA17 410 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 ZNF585AQ6P3V2 769 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 FBXO46Q6PJ61 603 aaPredicted RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 KIRREL2Q6UWL6 708 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 OR5L2Q8NGL0 311 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 SCARB1Q8WTV0 552 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 CPNE2Q96FN4 548 aaPredicted RBP7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 MAP6Q96JE9 813 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 LPAR4Q99677 370 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 MAP3K3Q99759 626 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 DEFB126Q9BYW3 111 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 TPSD1Q9BZJ3 242 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 CDCP1Q9H5V8 836 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 SIP14410 1827 aa7.52□□□□□ -1.21
PRKAB1-207ENST00000542698 BORCS7-ASMTA0A0B4J1R7 106 aa7.51□□□□□ -1.21
PRKAB1-207ENST00000542698 hCG_1807616A0A1W2PRN6 198 aa7.51□□□□□ -1.21
PRKAB1-207ENST00000542698 SCO1O75880 301 aa7.51□□□□□ -1.21
PRKAB1-207ENST00000542698 FARS2O95363 451 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms