RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 MNAT1P51948 309 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 ART1P52961 327 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 TGFBR3Q03167 851 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 KEAP1Q14145 624 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 HIST3H3Q16695 136 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 DEFB113Q30KQ7 82 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 TBRG1Q3YBR2 411 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 SPATS1Q496A3 300 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 ARMC4Q5T2S8 1044 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 HMBOX1Q6NT76 420 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 ADAM5Q6NVV9 412 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 MBOAT2Q6ZWT7 520 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 HIST3H2AQ7L7L0 130 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 TRPM8Q7Z2W7 1104 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 KRTAP1-3Q8IUG1 177 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 GPR137CQ8N3F9 429 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 C17orf78Q8N4C9 275 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 ANKK1Q8NFD2 765 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 KBTBD8Q8NFY9 601 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 OR52J3Q8NH60 311 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 OR51A7Q8NH64 312 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 OR6X1Q8NH79 312 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 ACOT11Q8WXI4 607 aaPredicted RBP8.5□□□□□ -1.05
YBX3-212ENST00000542002 HIST1H2ACQ93077 130 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 SLC7A6OSQ96CW6 309 aaPredicted RBP8.5□□□□□ -1.05
YBX3-212ENST00000542002 MBD6Q96DN6 1003 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 DHRS1Q96LJ7 313 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 GPA33Q99795 319 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 FOXC2Q99958 501 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 MRPL13Q9BYD1 178 aaKnown RBP8.5□□□□□ -1.05
YBX3-212ENST00000542002 CXXC4Q9H2H0 198 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 ESRP2Q9H6T0 727 aaKnown RBP8.5□□□□□ -1.05
YBX3-212ENST00000542002 SEC61A2Q9H9S3 476 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 PLA2G2EQ9NZK7 142 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 MAGEL2Q9UJ55 1249 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 SAMD4AQ9UPU9 718 aaKnown RBP8.5□□□□□ -1.05
YBX3-212ENST00000542002 RNF115Q9Y4L5 304 aa8.5□□□□□ -1.05
YBX3-212ENST00000542002 TRAV27A0A087WT01 109 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 IGHV1-18A0A0C4DH31 117 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 A0A1W2PRQ8 180 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 E7EQL1 145 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 M0R1B8 84 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 ABCD4O14678 606 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 HS3ST1O14792 307 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 PTP4A3O75365 173 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 GMNNO75496 209 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 CD8AP01732 235 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 H1F0P07305 194 aaKnown RBP8.49□□□□□ -1.05
YBX3-212ENST00000542002 CD3EP07766 207 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 SOD3P08294 240 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 CELA3BP08861 270 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 DANCRP0C864 163 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 PGA4P0DJD7 388 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 PGA3P0DJD8 388 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 PRPS1P60891 318 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 RPS4XP62701 263 aaKnown RBP8.49□□□□□ -1.05
YBX3-212ENST00000542002 DGCR6Q14129 220 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 PGGHGQ32M88 737 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 ZNF672Q499Z4 452 aaPredicted RBP8.49□□□□□ -1.05
YBX3-212ENST00000542002 ANKRD16Q6P6B7 361 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 SPNS3Q6ZMD2 512 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 ZNF730Q6ZMV8 503 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 NANOGNBQ7Z5D8 188 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 ABHD12BQ7Z5M8 362 aaPredicted RBP8.49□□□□□ -1.05
YBX3-212ENST00000542002 MYPOPQ86VE0 399 aaPredicted RBP8.49□□□□□ -1.05
YBX3-212ENST00000542002 IGFN1Q86VF2 1251 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 RNF113BQ8IZP6 322 aaKnown RBP8.49□□□□□ -1.05
YBX3-212ENST00000542002 CLDN22Q8N7P3 220 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 OR13C2Q8NGS9 318 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 FGFBP3Q8TAT2 258 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 MAGEE2Q8TD90 523 aaPredicted RBP8.49□□□□□ -1.05
YBX3-212ENST00000542002 ASB10Q8WXI3 467 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 HTRA1Q92743 480 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 SLC25A44Q96H78 314 aaPredicted RBP8.49□□□□□ -1.05
YBX3-212ENST00000542002 NSMCE2Q96MF7 247 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 ZNF347Q96SE7 839 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 SEPHS2Q99611 448 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 PIP5K1AQ99755 562 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 NOX3Q9HBY0 568 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 NGBQ9NPG2 151 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 IL1RAPQ9NPH3 570 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 NDE1Q9NXR1 346 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 B3GNT2Q9NY97 397 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 GLTPQ9NZD2 209 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 ZNF224Q9NZL3 707 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 ACTR3BQ9P1U1 418 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 HIF3AQ9Y2N7 669 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 ALPK2Q86TB3 2170 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 CREBBPQ92793 2442 aa8.49□□□□□ -1.05
YBX3-212ENST00000542002 AKAP6Q13023 2319 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 ARPC4-TTLL3A0A0A6YYG9 625 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 IGKV1D-43A0A0B4J1Z2 117 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 ZNF99A8MXY4 864 aaPredicted RBP8.48□□□□□ -1.05
YBX3-212ENST00000542002 EFCAB9A8MZ26 197 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 ACOT8O14734 319 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 TRMUO75648 421 aaKnown RBP8.48□□□□□ -1.05
YBX3-212ENST00000542002 BCL10O95999 233 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 QDPRP09417 244 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 PATE4P0C8F1 98 aa8.48□□□□□ -1.05
YBX3-212ENST00000542002 PTAFRP25105 342 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms