RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 SCP2D1Q9UJQ7 156 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 ACACAQ13085 2346 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 PIEZO2Q9H5I5 2752 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 APC2O95996 2303 aa13.08□□□□□ -0.32
SFSWAP-210ENST00000541286 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 ADRB1P08588 477 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 FASLGP48023 281 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 CLDN12P56749 244 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 SHC2P98077 582 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 HSD17B12Q53GQ0 312 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 NHLRC3Q5JS37 347 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 HBMQ6B0K9 141 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 SSX6Q7RTT6 188 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 OR5M3Q8NGP4 307 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 GIMAP5Q96F15 307 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 LYARQ9NX58 379 aaKnown RBP13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 POMT2Q9UKY4 750 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 RCE1Q9Y256 329 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 SMG1Q96Q15 3661 aaKnown RBP13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 ANKRD61A6NGH8 418 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 CAPZBP47756 277 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 ERV3-1Q14264 604 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 BEX5Q5H9J7 111 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 DCST2Q5T1A1 773 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 RGS7BPQ6MZT1 257 aaPredicted RBP13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 TFAP2EQ6VUC0 442 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 ZAR1Q86SH2 424 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 PRSS58Q8IYP2 241 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 MOAP1Q96BY2 351 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 PEX11GQ96HA9 241 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 OR1F2PQ96R84 312 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 PDCD1LG2Q9BQ51 273 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 SLC25A18Q9H1K4 315 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 GNG8Q9UK08 70 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 MED31Q9Y3C7 131 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 SPAARA0A1B0GVQ0 90 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 C7orf66A4D0T2 115 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 FMO6PO60774 539 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 SOX30O94993 753 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 F12P00748 615 aaPredicted RBP13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 FOLR1P15328 257 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 FXYD6P3P58550 94 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 MAT1AQ00266 395 aaKnown RBP13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 LGALS3BPQ08380 585 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 ODF4Q2M2E3 257 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 ARMC6Q6NXE6 501 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 OGFOD3Q6PK18 319 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 OOSP2Q86WS3 158 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 GID4Q8IVV7 300 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 LINC00469Q8N7U9 141 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 SNX33Q8WV41 574 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 GINS4Q9BRT9 223 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 ZNF649Q9BS31 505 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 IFT22Q9H7X7 185 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 EVA1AQ9H8M9 152 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 AKIRIN1Q9H9L7 192 aaPredicted RBP13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 DHCR7Q9UBM7 475 aaKnown RBP13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 HEBP2Q9Y5Z4 205 aa13.07□□□□□ -0.32
SFSWAP-210ENST00000541286 IMPA2O14732 288 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 B3GALT2O43825 422 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 CD59P13987 128 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 CPMP14384 443 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 GLB1P16278 677 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 PHF19Q5T6S3 580 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 PEAR1Q5VY43 1037 aaPredicted RBP13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 LINGO2Q7L985 606 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 LRRC28Q86X40 367 aaPredicted RBP13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 MEIOBQ8N635 442 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 OR2M2Q96R28 347 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 CYSLTR2Q9NS75 346 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 ASB6Q9NWX5 421 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 TRABD2BA6NFA1 517 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 H0YGG7 62 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 STX11O75558 287 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 RPP14O95059 124 aaKnown RBP13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 TIAF1O95411 115 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 RAB3BP20337 219 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 NPR2P20594 1047 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 ZNF136P52737 540 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 ARF3P61204 181 aaPredicted RBP13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 NDUFAF6Q330K2 333 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 AKIRIN2Q53H80 203 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 HES5Q5TA89 166 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 SHISA6Q6ZSJ9 500 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 C17orf82Q86X59 251 aaPredicted RBP13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 C10orf53Q8N6V4 93 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 MFSD9Q8NBP5 474 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 KCTD12Q96CX2 325 aaKnown RBP13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 ISYNA1Q9NPH2 558 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 KLK11Q9UBX7 282 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 KCNE5Q9UJ90 142 aa13.06□□□□□ -0.32
SFSWAP-210ENST00000541286 FGF17O60258 216 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 IGHA1P01876 353 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 SULT1A3P0DMM9 295 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 SULT1A4P0DMN0 295 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 PSMA6P60900 246 aaKnown RBP13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 SERTAD2Q14140 314 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 C1orf189Q5VU69 101 aa13.05□□□□□ -0.32
SFSWAP-210ENST00000541286 DHRS13Q6UX07 377 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms