RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 GPX7Q96SL4 187 aaPredicted RBP8.3□□□□□ -1.08
DDX55-208ENST00000541259 ADI1Q9BV57 179 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 EMC6Q9BV81 110 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 POLDIP3Q9BY77 421 aaKnown RBP8.3□□□□□ -1.08
DDX55-208ENST00000541259 TXNIPQ9H3M7 391 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 RNF122Q9H9V4 155 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 CALHM2Q9HA72 323 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 SLC25A19Q9HC21 320 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 TVP23BQ9NYZ1 205 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 NDRG4Q9ULP0 352 aaKnown RBP8.3□□□□□ -1.08
DDX55-208ENST00000541259 ZNF175Q9Y473 711 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 NOX1Q9Y5S8 564 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 FLVCR1Q9Y5Y0 555 aa8.3□□□□□ -1.08
DDX55-208ENST00000541259 FAM208BQ5VWN6 2430 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 IGKV3D-15A0A087WSY6 115 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 TEX13CA0A0J9YWL9 993 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 CD8B2A6NJW9 211 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 H7C1C5 153 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 SLC16A6O15403 523 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 ICMTO60725 284 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 VAMP5O95183 116 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 IGHMP01871 453 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 GNAO1P09471 354 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 GABRA1P14867 456 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 HIST1H1CP16403 213 aaKnown RBP8.29□□□□□ -1.08
DDX55-208ENST00000541259 EDNRAP25101 427 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 GRK5P34947 590 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 GGT2P36268 569 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 ACVR1BP36896 505 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 CAPGP40121 348 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 RPS6KA3P51812 740 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 SMSP52788 366 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 SLC16A1P53985 500 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 BIDP55957 195 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 CLDN17P56750 224 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 RPL27P61353 136 aaKnown RBP8.29□□□□□ -1.08
DDX55-208ENST00000541259 LCN6P62502 163 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 MYBPC1Q00872 1141 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 TLE1Q04724 770 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 RBPJQ06330 500 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 LGALS3BPQ08380 585 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 FOXF2Q12947 444 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 PDK3Q15120 406 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 POU4F3Q15319 338 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 ZNF362Q5T0B9 420 aaPredicted RBP8.29□□□□□ -1.08
DDX55-208ENST00000541259 ARMC4Q5T2S8 1044 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 C12orf73Q69YU5 71 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 ALKBH2Q6NS38 261 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 SLC27A4Q6P1M0 643 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 PTCHD4Q6ZW05 846 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.29□□□□□ -1.08
DDX55-208ENST00000541259 NUFIP2Q7Z417 695 aaKnown RBP8.29□□□□□ -1.08
DDX55-208ENST00000541259 MCEMP1Q8IX19 187 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 GCNT2Q8N0V5 402 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 SLC43A2Q8N370 569 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 MARVELD2Q8N4S9 558 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 ZNF555Q8NEP9 628 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 OR2T33Q8NG76 320 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 OR4K13Q8NH42 304 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 ZNF519Q8TB69 540 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 ASB10Q8WXI3 467 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 TFAP2CQ92754 450 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 HRASLS5Q96KN8 279 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 ZNF184Q99676 751 aaPredicted RBP8.29□□□□□ -1.08
DDX55-208ENST00000541259 PITX2Q99697 317 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 SF3B5Q9BWJ5 86 aaKnown RBP8.29□□□□□ -1.08
DDX55-208ENST00000541259 TP63Q9H3D4 680 aaPredicted RBP8.29□□□□□ -1.08
DDX55-208ENST00000541259 GRHPRQ9UBQ7 328 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 AASSQ9UDR5 926 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 ENOPH1Q9UHY7 261 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 OSGIN2Q9Y236 505 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 GMPPBQ9Y5P6 360 aa8.29□□□□□ -1.08
DDX55-208ENST00000541259 TRGV8A0A0C4DH27 118 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 MBD3L4A6NDZ8 208 aaPredicted RBP8.28□□□□□ -1.08
DDX55-208ENST00000541259 MBD3L3A6NE82 208 aaPredicted RBP8.28□□□□□ -1.08
DDX55-208ENST00000541259 MBD3L5A6NJ08 208 aaPredicted RBP8.28□□□□□ -1.08
DDX55-208ENST00000541259 B8ZZF3 427 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 ARPC3O15145 178 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 SURF4O15260 269 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 ARHGEF9O43307 516 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 PRKYO43930 277 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 TRMUO75648 421 aaKnown RBP8.28□□□□□ -1.08
DDX55-208ENST00000541259 ZNF432O94892 652 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 TXNDC12O95881 172 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 BCL10O95999 233 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 YES1P07947 543 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 GLI4P10075 376 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 SDHAP31040 664 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 PTGER4P35408 488 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 CDKN2AP42771 156 aaKnown RBP8.28□□□□□ -1.08
DDX55-208ENST00000541259 SELENOPP49908 381 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 EFNB1P98172 346 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.28□□□□□ -1.08
DDX55-208ENST00000541259 PMPCAQ10713 525 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 CAMK2DQ13557 499 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 KRR1Q13601 381 aaKnown RBP8.28□□□□□ -1.08
DDX55-208ENST00000541259 RNPS1Q15287 305 aaKnown RBP8.28□□□□□ -1.08
DDX55-208ENST00000541259 TAF11Q15544 211 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 SNAPC1Q16533 368 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 MESTQ5EB52 335 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms