RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 TMEM65Q6PI78 240 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 GRAMD2AQ8IUY3 354 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 SGTBQ96EQ0 304 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 WDR89Q96FK6 387 aaPredicted RBP11.39□□□□□ -0.59
RNF4-222ENST00000541204 RADILQ96JH8 1075 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 CMTM3Q96MX0 182 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.39□□□□□ -0.59
RNF4-222ENST00000541204 NRSN2Q9GZP1 204 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 MKKSQ9NPJ1 570 aaPredicted RBP11.39□□□□□ -0.59
RNF4-222ENST00000541204 NPDC1Q9NQX5 325 aaPredicted RBP11.39□□□□□ -0.59
RNF4-222ENST00000541204 POLE3Q9NRF9 147 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 AKAP7Q9P0M2 348 aaPredicted RBP11.39□□□□□ -0.59
RNF4-222ENST00000541204 ZNF69Q9UC07 566 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 ZNF281Q9Y2X9 895 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 V9GY05 133 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 A0A1B0GUH1 482 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 PRAF2O60831 178 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 RPP14O95059 124 aaKnown RBP11.39□□□□□ -0.59
RNF4-222ENST00000541204 RRASP10301 218 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 DCTDP32321 178 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 GABRA4P48169 554 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 LINC00303Q3SY05 128 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 TMEM69Q5SWH9 247 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 C1orf189Q5VU69 101 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 MED25Q71SY5 747 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 SPERTQ8NA61 448 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 C1orf216Q8TAB5 229 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 PMM1Q92871 262 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 GAL3ST4Q96RP7 486 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.39□□□□□ -0.59
RNF4-222ENST00000541204 EMC3Q9P0I2 261 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 OR5V1Q9UGF6 321 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 FOXJ3Q9UPW0 622 aa11.39□□□□□ -0.59
RNF4-222ENST00000541204 TLCD2A6NGC4 264 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 PDCD5O14737 125 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 GPRIN2O60269 458 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 CD1AP06126 327 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 AP3S2P59780 193 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 HNRNPKP61978 463 aaKnown RBP eCLIP11.38□□□□□ -0.59
RNF4-222ENST00000541204 MFSD13AQ14CX5 517 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 S100A16Q96FQ6 103 aaKnown RBP11.38□□□□□ -0.59
RNF4-222ENST00000541204 GSX2Q9BZM3 304 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 PCDHGA5Q9Y5G8 931 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 THADAQ6YHU6 1953 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 UNC13CQ8NB66 2214 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 A0A1W2PPL8 197 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 C17orf51A8MQB3 221 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 LMO7DNF2Z398 122 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 HPGDP15428 266 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 CDK2P24941 298 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 P2RX1P51575 399 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 OPCMLQ14982 345 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 C14orf28Q4W4Y0 310 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 PWWP2BQ6NUJ5 590 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 GLDNQ6ZMI3 551 aaPredicted RBP11.38□□□□□ -0.59
RNF4-222ENST00000541204 DPY19L2P2Q6ZN68 376 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 SHISA6Q6ZSJ9 500 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 SLC43A2Q8N370 569 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 MEIOBQ8N635 442 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 ZNF511Q8NB15 262 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 RNF166Q96A37 237 aaPredicted RBP11.38□□□□□ -0.59
RNF4-222ENST00000541204 LRFN5Q96NI6 719 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 TSSK2Q96PF2 358 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 CUTCQ9NTM9 273 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 PIPOXQ9P0Z9 390 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 FKBP7Q9Y680 259 aa11.38□□□□□ -0.59
RNF4-222ENST00000541204 ANKRD20A5PA0PJZ0 165 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 NAP1L6A6NFF2 107 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 LILRA5A6NI73 299 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 OIP5O43482 229 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 CXCL2P19875 107 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 SOX2P48431 317 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 CD226Q15762 336 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 VWA2Q5GFL6 755 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 ELFN2Q5R3F8 820 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 POMZP3Q6PJE2 187 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 CBLN3Q6UW01 205 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 CDH24Q86UP0 819 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 C10orf53Q8N6V4 93 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 UXS1Q8NBZ7 420 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 FAM71CQ8NEG0 241 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 DNAAF1Q8NEP3 725 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 ELMOD3Q96FG2 381 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 KLHDC3Q9BQ90 382 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 G6PC3Q9BUM1 346 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 C1QTNF6Q9BXI9 259 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 RDH8Q9NYR8 311 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 TAS2R10Q9NYW0 307 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 WDFY4Q6ZS81 3184 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 SERINC4A6NH21 518 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 RGS11O94810 467 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 DCNP07585 359 aaKnown RBP11.37□□□□□ -0.59
RNF4-222ENST00000541204 TMIGD3P0DMS9 266 aaPredicted RBP11.37□□□□□ -0.59
RNF4-222ENST00000541204 OR8G3PP0DMU2 310 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 PRKACBP22694 351 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 HSD17B7P56937 341 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 NXPH1P58417 271 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 GRM7Q14831 915 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 LEG1Q6P5S2 330 aa11.37□□□□□ -0.59
RNF4-222ENST00000541204 SLC35F3Q8IY50 421 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms