RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 CHST2Q9Y4C5 530 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 PDCD11Q14690 1871 aaKnown RBP8.7□□□□□ -1.02
TTC39C-203ENST00000540918 ATRXP46100 2492 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 TEX13DA0A0J9YY54 714 aaPredicted RBP8.7□□□□□ -1.02
TTC39C-203ENST00000540918 GPX5O75715 221 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 CD46P15529 392 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 MAP2K3P46734 347 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 ZNF117Q03924 483 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 TMEM201Q5SNT2 666 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 HBMQ6B0K9 141 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 ZNF704Q6ZNC4 412 aaPredicted RBP8.7□□□□□ -1.02
TTC39C-203ENST00000540918 SLC16A14Q7RTX9 510 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 SLC46A3Q7Z3Q1 461 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 CD163Q86VB7 1156 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 DTWD2Q8NBA8 298 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 GOT1L1Q8NHS2 421 aaPredicted RBP8.7□□□□□ -1.02
TTC39C-203ENST00000540918 ABHD4Q8TB40 342 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 DPAGT1Q9H3H5 408 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 ZNF442Q9H7R0 627 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 FKBP14Q9NWM8 211 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 SLC22A13Q9Y226 551 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 SLC5A6Q9Y289 635 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 HSPB11Q9Y547 144 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 SPG11Q96JI7 2443 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 TRBV5-3A0A0A0MS03 114 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 POU2F2P09086 479 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 GABRR1P24046 479 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 GPR3P46089 330 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 HTR5AP47898 357 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 ART1P52961 327 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 MLLT11Q13015 90 aaPredicted RBP8.7□□□□□ -1.02
TTC39C-203ENST00000540918 TGIF1Q15583 401 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 FAM205BPQ63HN1 556 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 PRSS45Q7RTY3 260 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 CAMKMTQ7Z624 323 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 PHC2Q8IXK0 858 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 IL17RDQ8NFM7 739 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 OR1N1Q8NGS0 311 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 C10orf90Q96M02 699 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 MOGAT1Q96PD6 335 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 MENTQ9BUN1 341 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 ST6GALNAC5Q9BVH7 336 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 ZNF350Q9GZX5 532 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 METTL8Q9H825 291 aaKnown RBP8.7□□□□□ -1.02
TTC39C-203ENST00000540918 GPN1Q9HCN4 374 aaPredicted RBP8.7□□□□□ -1.02
TTC39C-203ENST00000540918 P4HTMQ9NXG6 502 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 BOKQ9UMX3 212 aaPredicted RBP8.7□□□□□ -1.02
TTC39C-203ENST00000540918 A0A0G2JMZ2 1700 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 MGAMO43451 1857 aa8.7□□□□□ -1.02
TTC39C-203ENST00000540918 A0A087WV62 115 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 CYR61O00622 381 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 THBS1P07996 1170 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 ICAM2P13598 275 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 HTR1FP30939 366 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 TBC1D25Q3MII6 688 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 YOD1Q5VVQ6 348 aaPredicted RBP8.69□□□□□ -1.02
TTC39C-203ENST00000540918 ZNF585AQ6P3V2 769 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 FAHD1Q6P587 224 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 FNDC8Q8TC99 324 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 GCDHQ92947 438 aaPredicted RBP8.69□□□□□ -1.02
TTC39C-203ENST00000540918 ZC3HAV1LQ96H79 300 aaKnown RBP8.69□□□□□ -1.02
TTC39C-203ENST00000540918 ENKD1Q9H0I2 346 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 NUDT15Q9NV35 164 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 HRH3Q9Y5N1 445 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 AKR1C4P17516 323 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 SPI1P17947 270 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 SERPINA2P20848 420 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 MRPL19P49406 292 aaKnown RBP8.69□□□□□ -1.02
TTC39C-203ENST00000540918 CSNK2A1P68400 391 aaPredicted RBP8.69□□□□□ -1.02
TTC39C-203ENST00000540918 AQP6Q13520 282 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 RAB11BQ15907 218 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 ABCA11PQ4W5N1 156 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 DHRS4L2Q6PKH6 230 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 H1FNTQ75WM6 255 aaPredicted RBP8.69□□□□□ -1.02
TTC39C-203ENST00000540918 SNIP1Q8TAD8 396 aaKnown RBP8.69□□□□□ -1.02
TTC39C-203ENST00000540918 TBC1D15Q8TC07 691 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 DCLRE1CQ96SD1 692 aaKnown RBP8.69□□□□□ -1.02
TTC39C-203ENST00000540918 GPA33Q99795 319 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 MESP1Q9BRJ9 268 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 KCNG2Q9UJ96 466 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 KCND3Q9UK17 655 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 NXT1Q9UKK6 140 aaKnown RBP8.69□□□□□ -1.02
TTC39C-203ENST00000540918 ALDH3B2P48448 385 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 CSRP3P50461 194 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 CEBPGP53567 150 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 OR10A3P58181 314 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 HES3Q5TGS1 186 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 SPINK14Q6IE38 97 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 OR10K2Q6IF99 312 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 DPY19L2P2Q6ZN68 376 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 OR51D1Q8NGF3 324 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 OR8D4Q8NGM9 314 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 OR5M9Q8NGP3 310 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 SYNPRQ8TBG9 265 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 TOMM40LQ969M1 308 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 ALKBH3Q96Q83 286 aaPredicted RBP8.69□□□□□ -1.02
TTC39C-203ENST00000540918 DUSP21Q9H596 190 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 NOSIPQ9Y314 301 aaKnown RBP8.69□□□□□ -1.02
TTC39C-203ENST00000540918 IGHV5-10-1A0A0J9YXX1 117 aa8.69□□□□□ -1.02
TTC39C-203ENST00000540918 A0A1B0GTQ1 180 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms