RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 CD96P40200 585 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 NOVA1P51513 510 aaKnown RBP11□□□□□ -0.65
AP003559.1-201ENST00000540906 B3GALT5-AS1P59052 145 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 PUDPQ08623 228 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 ACSM1Q08AH1 577 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 ZP4Q12836 540 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 SLC35D3Q5M8T2 416 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 EEF1A1P5Q5VTE0 462 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 C22orf42Q6IC83 251 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 C3orf33Q6P1S2 294 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 TIGD4Q8IY51 512 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 GTPBP8Q8N3Z3 284 aaPredicted RBP11□□□□□ -0.65
AP003559.1-201ENST00000540906 ASB10Q8WXI3 467 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 RNF166Q96A37 237 aaPredicted RBP11□□□□□ -0.65
AP003559.1-201ENST00000540906 TMEM41AQ96HV5 264 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 SGCZQ96LD1 299 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 TMED9Q9BVK6 235 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 TSPAN10Q9H1Z9 355 aaPredicted RBP11□□□□□ -0.65
AP003559.1-201ENST00000540906 PTGES2Q9H7Z7 377 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 BABAM2Q9NXR7 383 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 ALKBH4Q9NXW9 302 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 DLL3Q9NYJ7 618 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 STMN3Q9NZ72 180 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 CORINQ9Y5Q5 1042 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 SHISA3A0PJX4 238 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 PRSS37A4D1T9 235 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 NEURL1O76050 574 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 OR6A2O95222 327 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 CTLA4P16410 223 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 CSRP1P21291 193 aaKnown RBP11□□□□□ -0.65
AP003559.1-201ENST00000540906 ITGA3P26006 1051 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 RPS19P39019 145 aaKnown RBP11□□□□□ -0.65
AP003559.1-201ENST00000540906 OR2B6P58173 313 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 OC90Q02509 493 aaPredicted RBP11□□□□□ -0.65
AP003559.1-201ENST00000540906 POU3F1Q03052 451 aaPredicted RBP11□□□□□ -0.65
AP003559.1-201ENST00000540906 TLE3Q04726 772 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 FMODQ06828 376 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 LGALS3BPQ08380 585 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 SELENBP1Q13228 472 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11□□□□□ -0.65
AP003559.1-201ENST00000540906 LCN1P1Q5VSP4 162 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 USP43Q70EL4 1123 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 YRDCQ86U90 279 aaKnown RBP11□□□□□ -0.65
AP003559.1-201ENST00000540906 DND1Q8IYX4 353 aaKnown RBP11□□□□□ -0.65
AP003559.1-201ENST00000540906 ZBTB8AQ96BR9 441 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 NXPE2Q96DL1 559 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 EMC6Q9BV81 110 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 CDADC1Q9BWV3 514 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 BARHL1Q9BZE3 327 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 B3GNT4Q9C0J1 378 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 INPP5EQ9NRR6 644 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 VSX1Q9NZR4 365 aaPredicted RBP11□□□□□ -0.65
AP003559.1-201ENST00000540906 B9D1Q9UPM9 204 aa11□□□□□ -0.65
AP003559.1-201ENST00000540906 IGLV1-36A0A0B4J1U3 117 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 SLC22A23A1A5C7 686 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 SMIM30A4D0T7 59 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 CD8B2A6NJW9 211 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 RENP00797 406 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 P04436 131 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 OR2T7P0C7T2 308 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 CD8BP10966 210 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 PSMA1P25786 263 aaKnown RBP10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 RBMS1P29558 406 aaKnown RBP10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 PSMB10P40306 273 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 BMXP51813 675 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 DSCR4P56555 118 aaPredicted RBP10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 POU4F2Q12837 409 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 RAET1LQ5VY80 246 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 TUBA3EQ6PEY2 450 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 TMPRSS11AQ6ZMR5 421 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 TMEM91Q6ZNR0 172 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 LINC00696Q6ZRV3 163 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 VASH1Q7L8A9 365 aaPredicted RBP10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 BTLAQ7Z6A9 289 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 ADCK1Q86TW2 530 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 SCAIQ8N9R8 606 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 POMGNT2Q8NAT1 580 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 OR2T27Q8NH04 317 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 PELI1Q96FA3 418 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 AMELYQ99218 206 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 TIMMDC1Q9NPL8 285 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 SERINC1Q9NRX5 453 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 SACM1LQ9NTJ5 587 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 MRPL22Q9NWU5 206 aaKnown RBP10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 ST6GALNAC2Q9UJ37 374 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 DKKL1Q9UK85 242 aa10.99□□□□□ -0.65
AP003559.1-201ENST00000540906 CNTRLQ7Z7A1 2325 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 A0A087WZY1 265 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 FAM47E-STBD1D6RA91 191 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 ZNF670-ZNF695F2Z2N8 137 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 J3QRK9 145 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 AKAP8O43823 692 aaKnown RBP10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 MPZL1O95297 269 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 WDPCPO95876 746 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 WNT11O96014 354 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 MT-ND5P03915 603 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 ADH6P28332 368 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 GABRA5P31644 462 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 RFC3P40938 356 aa10.98□□□□□ -0.65
AP003559.1-201ENST00000540906 CYB561P49447 251 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms