RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 RPL27P61353 136 aaKnown RBP13.67□□□□□ -0.22
DDB1-218ENST00000540784 ERVK-25P63136 954 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 LGALS3BPQ08380 585 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 MELKQ14680 651 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 RFX4Q33E94 735 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 ANKRD34AQ69YU3 496 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 HDDC2Q7Z4H3 204 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 AMIGO2Q86SJ2 522 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 IGFN1Q86VF2 1251 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 TMEM123Q8N131 208 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 LINC01560Q8TB33 94 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 LRTOMTQ8WZ04 291 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 KISS1RQ969F8 398 aaPredicted RBP13.67□□□□□ -0.22
DDB1-218ENST00000540784 ZNF566Q969W8 418 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 GTPBP3Q969Y2 492 aaKnown RBP13.67□□□□□ -0.22
DDB1-218ENST00000540784 NRBF2Q96F24 287 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 FEVQ99581 238 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 USB1Q9BQ65 265 aaKnown RBP13.67□□□□□ -0.22
DDB1-218ENST00000540784 B3GAT2Q9NPZ5 323 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 STX18Q9P2W9 335 aaKnown RBP13.67□□□□□ -0.22
DDB1-218ENST00000540784 GRHPRQ9UBQ7 328 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 MALT1Q9UDY8 824 aa13.67□□□□□ -0.22
DDB1-218ENST00000540784 NPIPB13A6NJU9 1138 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 NPIPB4C9JG80 1138 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 ANKRD65E5RJM6 399 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 ZNF587BE7ETH6 402 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 M0R3G1 203 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 ENTPD5O75356 428 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 LYZL6O75951 148 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 CD14P08571 375 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 ACADSP16219 412 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 ZNF26P17031 533 aaPredicted RBP13.66□□□□□ -0.22
DDB1-218ENST00000540784 PRKACGP22612 351 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 MPGP29372 298 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 CSNK1A1P48729 337 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 ROR2Q01974 943 aaKnown RBP13.66□□□□□ -0.22
DDB1-218ENST00000540784 TGFBR3Q03167 851 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 COX10Q12887 443 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 TOP3AQ13472 1001 aaPredicted RBP13.66□□□□□ -0.22
DDB1-218ENST00000540784 TSC22D1Q15714 1073 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 ARMC4Q5T2S8 1044 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 HMBOX1Q6NT76 420 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 SHQ1Q6PI26 577 aaKnown RBP13.66□□□□□ -0.22
DDB1-218ENST00000540784 DPY19L2P2Q6ZN68 376 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 BHLHA15Q7RTS1 189 aaPredicted RBP13.66□□□□□ -0.22
DDB1-218ENST00000540784 ZNF433Q8N7K0 673 aaPredicted RBP13.66□□□□□ -0.22
DDB1-218ENST00000540784 ACBD4Q8NC06 268 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 OR5K1Q8NHB7 308 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 ASB10Q8WXI3 467 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 KATNB1Q9BVA0 655 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 DGCR6LQ9BY27 220 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 POLDIP3Q9BY77 421 aaKnown RBP13.66□□□□□ -0.22
DDB1-218ENST00000540784 OR10A4Q9H209 315 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 ZNF556Q9HAH1 456 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 TAS2R16Q9NYV7 291 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 IL20RAQ9UHF4 553 aa13.66□□□□□ -0.22
DDB1-218ENST00000540784 SPTBN1Q01082 2364 aaKnown RBP13.66□□□□□ -0.22
DDB1-218ENST00000540784 ARRDC5A6NEK1 342 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 A6NIZ1 184 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 G3V2T6 193 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 PDLIM1O00151 329 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 CASKO14936 926 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 IGHG1P01857 330 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 PPP3CBP16298 524 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 CDH2P19022 906 aaPredicted RBP13.65□□□□□ -0.22
DDB1-218ENST00000540784 SLC6A6P31641 620 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 ACVR1BP36896 505 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 CLRN1P58418 232 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 RAP1BP61224 184 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 RAP1AP62834 184 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 PHYHD1Q5SRE7 291 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 C9orf135Q5VTT2 229 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 OR7E24Q6IFN5 339 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 THSD4Q6ZMP0 1018 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 RASSF6Q6ZTQ3 369 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 WDFY1Q8IWB7 410 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 HS3ST5Q8IZT8 346 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 ARIH2OSQ8N7S6 290 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 FANK1Q8TC84 345 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 TMEM54Q969K7 222 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 CENPNQ96H22 339 aaPredicted RBP13.65□□□□□ -0.22
DDB1-218ENST00000540784 SAMD8Q96LT4 415 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 DACH2Q96NX9 599 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 MUS81Q96NY9 551 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 WFIKKN1Q96NZ8 548 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 ACTR6Q9GZN1 396 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 OR52D1Q9H346 318 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 CRLF2Q9HC73 371 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 GPR35Q9HC97 309 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 S100A14Q9HCY8 104 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 NRIP3Q9NQ35 241 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 GLTPQ9NZD2 209 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 IER3IP1Q9Y5U9 82 aa13.65□□□□□ -0.22
DDB1-218ENST00000540784 COL12A1Q99715 3063 aa13.65□□□□□ -0.23
DDB1-218ENST00000540784 SH3D21A4FU49 640 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 CENPBD1B2RD01 187 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 RPL36A-HNRNPH2H7BZ11 118 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 TRMUO75648 421 aaKnown RBP13.64□□□□□ -0.23
DDB1-218ENST00000540784 IGHMP01871 453 aa13.64□□□□□ -0.23
DDB1-218ENST00000540784 ITGA5P08648 1049 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms