RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 PARD6BQ9BYG5 372 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 ULBP2Q9BZM5 246 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 RACGAP1Q9H0H5 632 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 TMEM27Q9HBJ8 222 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 MRPL39Q9NYK5 338 aaKnown RBP10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 SELENONQ9NZV5 590 aa10.33□□□□□ -0.76
CBX3P4-202ENST00000540428 A0A0B4J2E0 115 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 A0A1B0GX12 115 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 ZNF726A6NNF4 738 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 UBL3O95164 117 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 RAB36O95755 333 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 CBLP22681 906 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 PPIBP23284 216 aaKnown RBP10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 LSP1P33241 339 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 RAB1AP62820 205 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 CDK6Q00534 326 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 GALK2Q01415 458 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 CCNIQ14094 377 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 GCNT6Q5T4J0 391 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 GKAP1Q5VSY0 366 aaPredicted RBP10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 CARD17Q5XLA6 110 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 C12orf54Q6X4T0 127 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 RINLQ6ZS11 566 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 PXKQ7Z7A4 578 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 COMTD1Q86VU5 262 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 OR6N1Q8NGY5 312 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 CLDND2Q8NHS1 167 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 NFKBIDQ8NI38 313 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 MGARPQ8TDB4 240 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 TMEM186Q96B77 213 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 MS4A3Q96HJ5 214 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 TXNDC15Q96J42 360 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 TMEM43Q9BTV4 400 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 EMC6Q9BV81 110 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 ZNF385DQ9H6B1 395 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 TMEM38AQ9H6F2 299 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 MED29Q9NX70 200 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 SLC25A37Q9NYZ2 338 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 ZNF224Q9NZL3 707 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 SLC7A8Q9UHI5 535 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 RAB21Q9UL25 225 aa10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 ZNF346Q9UL40 294 aaKnown RBP10.32□□□□□ -0.76
CBX3P4-202ENST00000540428 TPST1O60507 370 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 ENTPD5O75356 428 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 MT-ATP6P00846 226 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 HPXP02790 462 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 MSMBP08118 114 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 SAGP10523 405 aaPredicted RBP10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 B4GALT1P15291 398 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 GIPRP48546 466 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 PTDSS1P48651 473 aaKnown RBP10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 RGS8P57771 180 aaPredicted RBP10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 STX1BP61266 288 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 PIGFQ07326 219 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 PMS2P3Q13401 168 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 OR1Q1Q15612 314 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 GLIPR1L2Q4G1C9 344 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 PIWIL3Q7Z3Z3 882 aaKnown RBP10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 TEX29Q8N6K0 151 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 SEMA6DQ8NFY4 1073 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 ZNF607Q96SK3 696 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 SYT3Q9BQG1 590 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 ZNF416Q9BWM5 594 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 METTL17Q9H7H0 456 aaPredicted RBP10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 HIF1ANQ9NWT6 349 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 SLC13A4Q9UKG4 626 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 CORO2BQ9UQ03 480 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 GRIP1Q9Y3R0 1128 aa10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 V9GYY5 206 aaPredicted RBP10.31□□□□□ -0.76
CBX3P4-202ENST00000540428 SLC22A23A1A5C7 686 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 PLPP3O14495 311 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 FMO6PO60774 539 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 SERPINB7O75635 380 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 SERPINA5P05154 406 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 GAAP10253 952 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 TCN1P20061 433 aaPredicted RBP10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 AHCYP23526 432 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 COL8A2P25067 703 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 ALDH3B1P43353 468 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 CSNK1A1P48729 337 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 SEC24CP53992 1094 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 AQP5P55064 265 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 CAMK2DQ13557 499 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 SCARB2Q14108 478 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 MMEL1Q495T6 779 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 EPGNQ6UW88 154 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 DPPA2Q7Z7J5 298 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 RANBP3LQ86VV4 465 aaPredicted RBP10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 MSRB3Q8IXL7 192 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 OR5J2Q8NH18 312 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 OR51F2Q8NH61 342 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 RNF217Q8TC41 542 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 MOGAT1Q96PD6 335 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 OCEL1Q9H607 264 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 ZNF275Q9NSD4 429 aaPredicted RBP10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 NKIRAS1Q9NYS0 192 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 GPR160Q9UJ42 338 aa10.3□□□□□ -0.76
CBX3P4-202ENST00000540428 TRBV5-3A0A0A0MS03 114 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms