RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 R3HDM4Q96D70 268 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 IP6K3Q96PC2 410 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 TIMP4Q99727 224 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 WFDC6Q9BQY6 131 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 ADGRE3Q9BY15 652 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 CIPCQ9C0C6 399 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 SLITRK2Q9H156 845 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 UBQLN3Q9H347 655 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 HRH4Q9H3N8 390 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 BPIFA1Q9NP55 256 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 DEC1Q9P2X7 70 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 CPED1A4D0V7 1026 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 ZNF726A6NNF4 738 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 PRRT4C9JH25 899 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 ZNF821O75541 412 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 CH25HO95992 272 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 SLC25A4P12235 298 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 CR2P20023 1033 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 P2RX1P51575 399 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 STXBP1P61764 594 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 RAP1AP62834 184 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 PTSQ03393 145 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 TFF2Q03403 129 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 CLN3Q13286 438 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 PIN1Q13526 163 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 CBFBQ13951 182 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 TAF13Q15543 124 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 OR7A5Q15622 319 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 GGTA1PQ4G0N0 100 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 ACSM3Q53FZ2 586 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 ACTBL2Q562R1 376 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 AWAT1Q58HT5 328 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 RNASE10Q5GAN6 216 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 CLEC12AQ5QGZ9 265 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 FRG2Q64ET8 278 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 DHRS11Q6UWP2 260 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 ZNF574Q6ZN55 896 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 C19orf47Q8N9M1 422 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 OR5AP2Q8NGF4 316 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 OR13C5Q8NGS8 318 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 OR6K2Q8NGY2 324 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 FRG2BQ96QU4 278 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 MTERF1Q99551 399 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 TBX5Q99593 518 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 SLC32A1Q9H598 525 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 FAM212BQ9NTI7 297 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 DOK5Q9P104 306 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 GULP1Q9UBP9 304 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 LHX3Q9UBR4 397 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 NUP210Q8TEM1 1887 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 RNASET2O00584 256 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 BNIP3LO60238 219 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 KLHL18O94889 574 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 CRHP06850 196 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 MSX1P28360 303 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 PTH2RP49190 550 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 RHOAP61586 193 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 ZNF234Q14588 700 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 ZNF385BQ569K4 471 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 ENTPD8Q5MY95 495 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 FAM199XQ6PEV8 388 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 PPP1R3BQ86XI6 285 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 CDK20Q8IZL9 346 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 LKAAEAR1Q8TD35 194 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 NUDCD2Q8WVJ2 157 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 TMED6Q8WW62 240 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 TRIB3Q96RU7 358 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 PHF7Q9BWX1 381 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 CHST6Q9GZX3 395 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 FN3KRPQ9HA64 309 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 TRIM36Q9NQ86 728 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 PRDM6Q9NQX0 595 aa8.67□□□□□ -1.02
CTNNA1-243ENST00000540387 FAM183AA6NL82 134 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 MFNGO00587 321 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 INSIG1O15503 277 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 FLRT2O43155 660 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 DLEU1O43261 78 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 PLPP2O43688 288 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 PRAMEF4O60810 478 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 AK1P00568 194 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 ARG1P05089 322 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 FAM157CP0CG43 387 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 NME2P22392 152 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 NDUFS1P28331 727 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 ACVR1BP36896 505 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 CD200P41217 278 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 MAP3K8P41279 467 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 SMIM11AP58511 58 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 ST8SIA6P61647 398 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 ITPRIPL2Q3MIP1 535 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 PRAMEF9Q5VWM5 478 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 PTRHD1Q6GMV3 140 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 CAMKMTQ7Z624 323 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 GPR137CQ8N3F9 429 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 C17orf47Q8NEP4 570 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 OR51G2Q8NGK0 314 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 AKR1E2Q96JD6 320 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 ASCL3Q9NQ33 180 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 RUVBL1Q9Y265 456 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 HS3ST2Q9Y278 367 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms