RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 C7orf66A4D0T2 115 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 GLCEO94923 617 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 MPZL1O95297 269 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 UTS2O95399 124 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 WNT11O96014 354 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 CSN2P05814 226 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 ZNF250P15622 560 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 RBM34P42696 430 aaKnown RBP12.41□□□□□ -0.42
BNIP3-202ENST00000540159 BLVRAP53004 296 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 PER3P56645 1201 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 YPEL5P62699 121 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 ZBTB37Q5TC79 503 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 FAM198BQ6UWH4 519 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 TEX261Q6UWH6 196 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 CREB3L2Q70SY1 520 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 TSPAN32Q96QS1 320 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 MICU1Q9BPX6 476 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 DLL4Q9NR61 685 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 PCDHGA5Q9Y5G8 931 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 U3KQ87 197 aa12.41□□□□□ -0.42
BNIP3-202ENST00000540159 LOC100509620A0A075B734 347 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 NPIPB9F8W1W9 429 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 ICMTO60725 284 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 LIPCP11150 499 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 ZNF141Q15928 474 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 OR7E24Q6IFN5 339 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 GRAMD2AQ8IUY3 354 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 SLITRK4Q8IW52 837 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 ADAMTS14Q8WXS8 1223 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 NKD1Q969G9 470 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 MMP25Q9NPA2 562 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 MRPL39Q9NYK5 338 aaKnown RBP12.4□□□□□ -0.42
BNIP3-202ENST00000540159 FBXL21Q9UKT6 434 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 SCML1Q9UN30 329 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 LEUTXA8MZ59 168 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 AIPO00170 330 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 TRIM3O75382 744 aaPredicted RBP12.4□□□□□ -0.42
BNIP3-202ENST00000540159 CD14P08571 375 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 SPARCP09486 303 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 DPP4P27487 766 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 EFNA3P52797 238 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 AP2S1P53680 142 aaPredicted RBP12.4□□□□□ -0.42
BNIP3-202ENST00000540159 CAMK2DQ13557 499 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 EXOSC2Q13868 293 aaKnown RBP12.4□□□□□ -0.42
BNIP3-202ENST00000540159 OR10K2Q6IF99 312 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 PWWP2BQ6NUJ5 590 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 NLRC3Q7RTR2 1065 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 SYS1Q8N2H4 156 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 ZNF615Q8N8J6 731 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 HAVCR2Q8TDQ0 301 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 FCAMRQ8WWV6 532 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 RNF166Q96A37 237 aaPredicted RBP12.4□□□□□ -0.42
BNIP3-202ENST00000540159 NPAS1Q99742 590 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 GINS4Q9BRT9 223 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 NOX3Q9HBY0 568 aa12.4□□□□□ -0.42
BNIP3-202ENST00000540159 ELF5Q9UKW6 265 aaPredicted RBP12.4□□□□□ -0.42
BNIP3-202ENST00000540159 PRRC2CQ9Y520 2896 aaKnown RBP12.4□□□□□ -0.43
BNIP3-202ENST00000540159 CHURC1-FNTBB4DL54 471 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 C2CD4DB7Z1M9 353 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 H0YIG0 161 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 PEX14O75381 377 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 KRT33AO76009 404 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 PTH2RP49190 550 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 FNTBP49356 437 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 P2RX1P51575 399 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 BIKQ13323 160 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 PRTGQ2VWP7 1150 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 BTN2A1Q7KYR7 527 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 FAM109AQ8N4B1 249 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 MEIOBQ8N635 442 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 PTPMT1Q8WUK0 201 aaPredicted RBP12.39□□□□□ -0.43
BNIP3-202ENST00000540159 S100A16Q96FQ6 103 aaKnown RBP12.39□□□□□ -0.43
BNIP3-202ENST00000540159 OR1F2PQ96R84 312 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 MSRAQ9UJ68 235 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 EIF1AYO14602 144 aaKnown RBP12.39□□□□□ -0.43
BNIP3-202ENST00000540159 ZNF264O43296 627 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 HIST1H2ABP04908 130 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 GAAP10253 952 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 PSMB1P20618 241 aaKnown RBP12.39□□□□□ -0.43
BNIP3-202ENST00000540159 DRD1P21728 446 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 EIF1AXP47813 144 aaKnown RBP12.39□□□□□ -0.43
BNIP3-202ENST00000540159 PCGF3Q3KNV8 242 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 TOR2AQ5JU69 321 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 HIST3H2AQ7L7L0 130 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 SLC2A12Q8TD20 617 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 HIST1H2ACQ93077 130 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 KLHL9Q9P2J3 617 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 PHF3Q92576 2039 aaKnown RBP12.39□□□□□ -0.43
BNIP3-202ENST00000540159 TMEM150CB9EJG8 249 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 ITGA10O75578 1167 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 UPK3AO75631 287 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 SLC22A5O76082 557 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 HOXC4P09017 264 aaPredicted RBP12.39□□□□□ -0.43
BNIP3-202ENST00000540159 IL11P20809 199 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 ZNF117Q03924 483 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 ALKBH1Q13686 389 aaKnown RBP12.39□□□□□ -0.43
BNIP3-202ENST00000540159 KLHL26Q53HC5 615 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 OR56B4Q8NH76 319 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 MSANTD3Q96H12 275 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 OR2M2Q96R28 347 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms