RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 CBR3O75828 277 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 ITGA3P26006 1051 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 DPP4P27487 766 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 S100A5P33763 92 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 ATP6V1E1P36543 226 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 ZP4Q12836 540 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 SPHARQ15513 63 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 MED22Q15528 200 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 GLYR1Q49A26 553 aaPredicted RBP15.21■□□□□ 0.03
COPS3-212ENST00000539941 CDONQ4KMG0 1287 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 KLHL12Q53G59 568 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 ARMCX4Q5H9R4 360 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 CEP78Q5JTW2 689 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 SLC35D3Q5M8T2 416 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 MDGA2Q7Z553 956 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 JAZF1Q86VZ6 243 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 CYB561A3Q8NBI2 242 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 SDR9C7Q8NEX9 313 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 OR6F1Q8NGZ6 308 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 HTRA1Q92743 480 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 KISS1RQ969F8 398 aaPredicted RBP15.21■□□□□ 0.03
COPS3-212ENST00000539941 MGLLQ99685 303 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 COQ7Q99807 217 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 AIFM2Q9BRQ8 373 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 NMNAT2Q9BZQ4 307 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 INPP5EQ9NRR6 644 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 ALKBH4Q9NXW9 302 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 GRHPRQ9UBQ7 328 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 CLEC2DQ9UHP7 191 aa15.21■□□□□ 0.03
COPS3-212ENST00000539941 TEX13CA0A0J9YWL9 993 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 ZSCAN5BA6NJL1 495 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 C1QTNF9BB2RNN3 333 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 J3QRE1 110 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 PLPP3O14495 311 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 SHOXO15266 292 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 EFNA2O43921 213 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 OR6A2O95222 327 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 IGHMP01871 453 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 F13BP05160 661 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 YES1P07947 543 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 C1QTNF9P0C862 333 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 CD36P16671 472 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 ZNF17P17021 662 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 GTF2E2P29084 291 aaKnown RBP15.2■□□□□ 0.02
COPS3-212ENST00000539941 TGFBR2P37173 567 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 ETV1P50549 477 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 SLC25A1P53007 311 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 AP2S1P53680 142 aaPredicted RBP15.2■□□□□ 0.02
COPS3-212ENST00000539941 RRADP55042 308 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 RPS7P62081 194 aaKnown RBP15.2■□□□□ 0.02
COPS3-212ENST00000539941 RTP5Q14D33 572 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 MCFD2Q8NI22 146 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 ZNF417Q8TAU3 575 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 SETD6Q8TBK2 473 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 THAP4Q8WY91 577 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 RASD2Q96D21 266 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 Q96M85 177 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 OR5M11Q96RB7 305 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 ZNF587Q96SQ5 575 aaPredicted RBP15.2■□□□□ 0.02
COPS3-212ENST00000539941 OR51V1Q9H2C8 321 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 ABCB10Q9NRK6 738 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 DDX28Q9NUL7 540 aaKnown RBP15.2■□□□□ 0.02
COPS3-212ENST00000539941 KLK13Q9UKR3 277 aa15.2■□□□□ 0.02
COPS3-212ENST00000539941 LIPT2A6NK58 231 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 CCRL2O00421 344 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 TFPIP10646 304 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 LIPAP38571 399 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 NKX2-5P52952 324 aaPredicted RBP15.19■□□□□ 0.02
COPS3-212ENST00000539941 SOX8P57073 446 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 OC90Q02509 493 aaPredicted RBP15.19■□□□□ 0.02
COPS3-212ENST00000539941 GGTLC2Q14390 218 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 TGIF1Q15583 401 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 ATAD3CQ5T2N8 411 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 FAM109AQ8N4B1 249 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 ADPRHL1Q8NDY3 354 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 IL17RDQ8NFM7 739 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 OR4F15Q8NGB8 312 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 ARL5BQ96KC2 179 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 TSPAN32Q96QS1 320 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 NMNAT3Q96T66 252 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 UTP23Q9BRU9 249 aaKnown RBP15.19■□□□□ 0.02
COPS3-212ENST00000539941 SLIRPQ9GZT3 109 aaKnown RBP15.19■□□□□ 0.02
COPS3-212ENST00000539941 ISYNA1Q9NPH2 558 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 DKKL1Q9UK85 242 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 HDGFL3Q9Y3E1 203 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 SPEF1Q9Y4P9 236 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 USP24Q9UPU5 2620 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 NPIPB13A6NJU9 1138 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 NPIPB4C9JG80 1138 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 LOC110117498-PIK3R3F6TDL0 507 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 RNF13O43567 381 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 APOL3O95236 402 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 SCG5P05408 212 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 LIMS3P0CW19 117 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 LIMS4P0CW20 117 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 RGS6P49758 472 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 WNT4P56705 351 aa15.19■□□□□ 0.02
COPS3-212ENST00000539941 TAGLNQ01995 201 aaKnown RBP15.19■□□□□ 0.02
COPS3-212ENST00000539941 MLLT11Q13015 90 aaPredicted RBP15.19■□□□□ 0.02
COPS3-212ENST00000539941 ZNF404Q494X3 552 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms