RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 PPIAL4AQ9Y536 164 aa11.98□□□□□ -0.49
SMARCA4-206ENST00000538456 CORINQ9Y5Q5 1042 aa11.98□□□□□ -0.49
SMARCA4-206ENST00000538456 OR2T1O43869 369 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 TYROBPO43914 113 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 HPRP00739 348 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 PATE4P0C8F1 98 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 RAB1AP62820 205 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 UBA52P62987 128 aaKnown RBP11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 CAMK2DQ13557 499 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 RAB39AQ14964 217 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 PDLIM3Q53GG5 364 aaPredicted RBP11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 DCAF12L2Q5VW00 463 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 WDFY1Q8IWB7 410 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 OR6N1Q8NGY5 312 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 SLC38A4Q969I6 547 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 SORT1Q99523 831 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 ZBTB18Q99592 522 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 ULBP2Q9BZM5 246 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 OR51B6Q9H340 312 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 ZNF385DQ9H6B1 395 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 AIG1Q9NVV5 245 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 TAAR3PQ9P1P4 343 aa11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 ZNF346Q9UL40 294 aaKnown RBP11.97□□□□□ -0.49
SMARCA4-206ENST00000538456 IGKV1D-42A0A075B6H8 117 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 SERPINI2O75830 405 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 ANP32DO95626 131 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 CLPTM1O96005 669 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 FAM157BP0CG42 384 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 LSP1P33241 339 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 SLC1A6P48664 564 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 DEFA6Q01524 100 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 LRRC74AQ0VAA2 488 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 ZP4Q12836 540 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 TMEM154Q6P9G4 183 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 SHISA2Q6UWI4 295 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 C6orf89Q6UWU4 347 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 NANPQ8TBE9 248 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 RNF217Q8TC41 542 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 RAB39BQ96DA2 213 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 TXNDC15Q96J42 360 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 TSPAN32Q96QS1 320 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 FOXB1Q99853 325 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 ZNF747Q9BV97 191 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 ZNF696Q9H7X3 374 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 MEAF6Q9HAF1 191 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 HINT3Q9NQE9 182 aaKnown RBP11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 DDX28Q9NUL7 540 aaKnown RBP11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 KLHL14Q9P2G3 628 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 SLC7A8Q9UHI5 535 aa11.96□□□□□ -0.49
SMARCA4-206ENST00000538456 TRAV36DV7A0A075B6V5 113 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 A0A0G2JPF8 293 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 LOC102725191A0A1B0GVB3 256 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 A0A1B0GWA3 101 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 TMEM247A6NEH6 219 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 C17orf100A8MU93 164 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 HNRNPCL2B2RXH8 293 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 HNRNPCL3B7ZW38 293 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 MS4A18H0YCH9 400 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 ATP8B1O43520 1251 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 HNRNPCL1O60812 293 aaKnown RBP11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 FZD7O75084 574 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 DEAF1O75398 565 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 PRSS23O95084 383 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 UBL3O95164 117 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 HNRNPCL4P0DMR1 293 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 HTR2AP28223 471 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 RAD52P43351 418 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 MS4A18Q3C1V0 323 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 GTDC1Q4AE62 458 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 RGS7BPQ6MZT1 257 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 OGFOD2Q6N063 350 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 ZNF584Q8IVC4 421 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 MIER2Q8N344 545 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 SNX33Q8WV41 574 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 VPS33AQ96AX1 596 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 DUX5Q96PT3 197 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 C1QTNF5Q9BXJ0 243 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 TPT1P8Q9HAU6 139 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 PNPOQ9NVS9 261 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 IFT52Q9Y366 437 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 CACNG2Q9Y698 323 aa11.95□□□□□ -0.5
SMARCA4-206ENST00000538456 A0A087WUJ7 227 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 IGHV1-69-2A0A0G2JMI3 117 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 J3QLI3 93 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 TPD52L2O43399 206 aaKnown RBP11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 IGHV2-5P01817 119 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 NUDT7P0C024 238 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 CCL2P13500 99 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 KLF3P57682 345 aaPredicted RBP11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 ERVS71-1P61550 626 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 GLO1Q04760 184 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 ALG10BQ5I7T1 473 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 C5orf46Q6UWT4 87 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 ZNF627Q7L945 461 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 SNX32Q86XE0 403 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 PAQR4Q8N4S7 273 aaPredicted RBP11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 MREGQ8N565 214 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 ICA1LQ8NDH6 482 aa11.94□□□□□ -0.5
SMARCA4-206ENST00000538456 ADPRHL1Q8NDY3 354 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms