RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	THRB	P10828	461 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	GP1BB	P13224	206 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	NCK1	P16333	377 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	ZNF17	P17021	662 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	HOXB6	P17509	224 aa	Known RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	ELK4	P28324	431 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	IFNA8	P32881	189 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	KDELR2	P33947	212 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	HTR3A	P46098	478 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	IDH2	P48735	452 aa	Known RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	GZMM	P51124	257 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	HMGA2	P52926	109 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	RPS3A	P61247	264 aa	Known RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	EEF1A1	P68104	462 aa	Known RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	ADARB1	P78563	741 aa	Known RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	PMS2P3	Q13401	168 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	DAG1	Q14118	895 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	ZNF846	Q147U1	533 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	QPRT	Q15274	297 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	MAPK11	Q15759	364 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	HYAL4	Q2M3T9	481 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	TRIM16L	Q309B1	348 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	PLPPR5	Q32ZL2	321 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	PLA1A	Q53H76	456 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	SOWAHC	Q53LP3	525 aa	Predicted RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	CYBRD1	Q53TN4	286 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	RBM48	Q5RL73	367 aa	Known RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	GLYAT	Q6IB77	296 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	WBP2NL	Q6ICG8	309 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	CBLN3	Q6UW01	205 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	ENPP6	Q6UWR7	440 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	ARSK	Q6UWY0	536 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	DEF8	Q6ZN54	512 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	PLEKHM3	Q6ZWE6	761 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	CCDC80	Q76M96	950 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	CHMP1B	Q7LBR1	199 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	YRDC	Q86U90	279 aa	Known RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	OFCC1	Q8IZS5	231 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	C8orf59	Q8N0T1	100 aa	Predicted RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	EID3	Q8N140	333 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	CENPS	Q8N2Z9	138 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	PARP8	Q8N3A8	854 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	CLIP4	Q8N3C7	705 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	CADM2	Q8N3J6	435 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	ZNF843	Q8N446	348 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	FADS6	Q8N9I5	356 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	PAPD5	Q8NDF8	572 aa	Known RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	FAM71C	Q8NEG0	241 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	FAM83F	Q8NEG4	500 aa	Predicted RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	OR52E4	Q8NGH9	312 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	OR13F1	Q8NGS4	319 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	VANGL1	Q8TAA9	524 aa	Predicted RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	NEIL3	Q8TAT5	605 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	TRUB1	Q8WWH5	349 aa	Known RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	GEMIN6	Q8WXD5	167 aa	Known RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	ST8SIA1	Q92185	356 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	CNOT9	Q92600	299 aa	Known RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	POP5	Q969H6	163 aa	Known RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	SLC35B4	Q969S0	331 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	TAMM41	Q96BW9	452 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	SARAF	Q96BY9	339 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	NSMCE2	Q96MF7	247 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	GPR137	Q96N19	417 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	RDH12	Q96NR8	316 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	BBC3	Q96PG8	261 aa	Predicted RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	SLX1A	Q9BQ83	275 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	BCL7B	Q9BQE9	202 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	ZNF559	Q9BR84	538 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	RTN4R	Q9BZR6	473 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	OR2B2	Q9GZK3	357 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	WDR12	Q9GZL7	423 aa	Known RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	DEFB127	Q9H1M4	99 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	UBQLN3	Q9H347	655 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	HMG20A	Q9NP66	347 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	ACKR4	Q9NPB9	350 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	SERINC1	Q9NRX5	453 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	MED17	Q9NVC6	651 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	ACAD8	Q9UKU7	415 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	ICAM5	Q9UMF0	924 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	USP22	Q9UPT9	525 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	MRPS18C	Q9Y3D5	142 aa	Known RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	FAM32A	Q9Y421	112 aa	Known RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	DMRT1	Q9Y5R6	373 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	SPIN1	Q9Y657	262 aa	Predicted RBP	3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266		V9GYQ6	96 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	EML6	Q6ZMW3	1958 aa		3.87	□□□□□ -1.79
SNHG1-208	ENST00000538266	NIN	Q8N4C6	2090 aa		3.86	□□□□□ -1.79
SNHG1-208	ENST00000538266		A0A1B0GTH9	108 aa		3.86	□□□□□ -1.79
SNHG1-208	ENST00000538266	FUOM	A2VDF0	154 aa		3.86	□□□□□ -1.79
SNHG1-208	ENST00000538266	NPIPA2	E9PIF3	369 aa		3.86	□□□□□ -1.79
SNHG1-208	ENST00000538266	NPIPA3	F8WFD2	350 aa		3.86	□□□□□ -1.79
SNHG1-208	ENST00000538266	PYCARD-AS1	I3L0S3	204 aa		3.86	□□□□□ -1.79
SNHG1-208	ENST00000538266		M0R3H8	397 aa		3.86	□□□□□ -1.79
SNHG1-208	ENST00000538266	FAAH	O00519	579 aa		3.86	□□□□□ -1.79
SNHG1-208	ENST00000538266	ADAM10	O14672	748 aa		3.86	□□□□□ -1.79
SNHG1-208	ENST00000538266	BCKDK	O14874	412 aa		3.86	□□□□□ -1.79
SNHG1-208	ENST00000538266	MPPED1	O15442	326 aa		3.86	□□□□□ -1.79
SNHG1-208	ENST00000538266	SEC14L5	O43304	696 aa		3.86	□□□□□ -1.79
SNHG1-208	ENST00000538266	ZIC3	O60481	467 aa		3.86	□□□□□ -1.79
SNHG1-208	ENST00000538266	SLC19A2	O60779	497 aa		3.86	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms