RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 SLC25A25Q6KCM7 469 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 FAM199XQ6PEV8 388 aaPredicted RBP7.9□□□□□ -1.14
UBE3B-208ENST00000538070 KRT77Q7Z794 578 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 LUZP2Q86TE4 346 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 ATG4DQ86TL0 474 aaPredicted RBP7.9□□□□□ -1.14
UBE3B-208ENST00000538070 ZNF417Q8TAU3 575 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 STT3BQ8TCJ2 826 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 ZNF587Q96SQ5 575 aaPredicted RBP7.9□□□□□ -1.14
UBE3B-208ENST00000538070 SEC61A2Q9H9S3 476 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 INPP5EQ9NRR6 644 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 MED29Q9NX70 200 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 SLCO1C1Q9NYB5 712 aa7.9□□□□□ -1.14
UBE3B-208ENST00000538070 RPH3AQ9Y2J0 694 aaPredicted RBP7.9□□□□□ -1.14
UBE3B-208ENST00000538070 TMED7-TICAM2A0A0A6YYA0 188 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 MASP2O00187 686 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 PIN1P1O15428 100 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 SFTPDP35247 375 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 GDNFP39905 211 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 OC90Q02509 493 aaPredicted RBP7.9□□□□□ -1.15
UBE3B-208ENST00000538070 GRAMD2AQ8IUY3 354 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 POMGNT2Q8NAT1 580 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 PLPP7Q8NBV4 271 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 OR8H1Q8NGG4 311 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 OR2T4Q8NH00 348 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 OR52I2Q8NH67 350 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 OR14A16Q8NHC5 309 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 AKAP1Q92667 903 aaKnown RBP eCLIP7.9□□□□□ -1.15
UBE3B-208ENST00000538070 MRPL48Q96GC5 212 aaKnown RBP7.9□□□□□ -1.15
UBE3B-208ENST00000538070 OR2B2Q9GZK3 357 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 DPAGT1Q9H3H5 408 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 AKIRIN1Q9H9L7 192 aaPredicted RBP7.9□□□□□ -1.15
UBE3B-208ENST00000538070 PRDM6Q9NQX0 595 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 POLR1DQ9Y2S0 133 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 ZNF281Q9Y2X9 895 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 TMED7Q9Y3B3 224 aa7.9□□□□□ -1.15
UBE3B-208ENST00000538070 NPIPB9F8W1W9 429 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 FABP7O15540 132 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 ALOX12BO75342 701 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 ITGA10O75578 1167 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 AHSA1O95433 338 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 IL33O95760 270 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 DDAH2O95865 285 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 TACSTD2P09758 323 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 ANKRD34CP0C6C1 535 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 NPR2P20594 1047 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 THBS2P35442 1172 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 NXPH1P58417 271 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 PLA2G7Q13093 441 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 EBPQ15125 230 aaKnown RBP7.89□□□□□ -1.15
UBE3B-208ENST00000538070 Q5BKY6 102 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 PRAMEF20Q5VT98 475 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 PYHIN1Q6K0P9 492 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 GUSBP11Q6P575 273 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 FGD2Q7Z6J4 655 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 SLC38A9Q8NBW4 561 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 OR51D1Q8NGF3 324 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 ZNF775Q96BV0 537 aaPredicted RBP7.89□□□□□ -1.15
UBE3B-208ENST00000538070 INTS14Q96SY0 518 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 APMAPQ9HDC9 416 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 TAS2R10Q9NYW0 307 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 MRM2Q9UI43 246 aaKnown RBP7.89□□□□□ -1.15
UBE3B-208ENST00000538070 A0A0G2JK05 382 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 FAM172BPA6NC97 362 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 TIAF1O95411 115 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 PGCP20142 388 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 SDHAP31040 664 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 AFF3P51826 1226 aaKnown RBP7.89□□□□□ -1.15
UBE3B-208ENST00000538070 RPS15P62841 145 aaKnown RBP7.89□□□□□ -1.15
UBE3B-208ENST00000538070 FOXK1P85037 733 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 ELAVL1Q15717 326 aaKnown RBP7.89□□□□□ -1.15
UBE3B-208ENST00000538070 COL28A1Q2UY09 1125 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 ZNF248Q8NDW4 579 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 ZNF721Q8TF20 911 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 ARL5BQ96KC2 179 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 ZNF426Q9BUY5 554 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 WWTR1Q9GZV5 400 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 COMMD4Q9H0A8 199 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 STMN3Q9NZ72 180 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 SUSD2Q9UGT4 822 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 V9GY05 133 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 PTPRZ1P23471 2315 aaPredicted RBP7.89□□□□□ -1.15
UBE3B-208ENST00000538070 LILRA5A6NI73 299 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 SLC43A1O75387 559 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 TCRBP04435 133 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 APEHP13798 732 aaKnown RBP7.89□□□□□ -1.15
UBE3B-208ENST00000538070 CXCL12P48061 93 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 ACSM1Q08AH1 577 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 EFR3AQ14156 821 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 STPG1Q5TH74 334 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 OR10K2Q6IF99 312 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 ARSKQ6UWY0 536 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 ZNF627Q7L945 461 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 JAGN1Q8N5M9 183 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 DEDD2Q8WXF8 326 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 RNF170Q96K19 258 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 GTPBP2Q9BX10 602 aaKnown RBP7.89□□□□□ -1.15
UBE3B-208ENST00000538070 FRRS1LQ9P0K9 344 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 COA3Q9Y2R0 106 aaPredicted RBP7.89□□□□□ -1.15
UBE3B-208ENST00000538070 NOX1Q9Y5S8 564 aa7.89□□□□□ -1.15
UBE3B-208ENST00000538070 MN1Q10571 1320 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms