RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 RPL13AP40429 203 aaKnown RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 SLC17A1Q14916 467 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 TMEM81Q6P7N7 255 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 WDR74Q6RFH5 385 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 TMEM156Q8N614 296 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 WDR89Q96FK6 387 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 CMTM3Q96MX0 182 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 MS4A10Q96PG2 267 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ELOVL3Q9HB03 270 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ZNF331Q9NQX6 463 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 CLCF1Q9UBD9 225 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 CNMDO75829 334 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 FAM109BQ6ICB4 259 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 GDPD4Q6W3E5 623 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 Q6ZRG5 221 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 CATSPERGQ6ZRH7 1159 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 RDH10Q8IZV5 341 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 PGAP3Q96FM1 320 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 RGPD3A6NKT7 1758 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ZFHX2Q9C0A1 2572 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 TCRBV16S1A1N1A0A5B0 115 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 C2orf78A6NCI8 922 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 RGS11O94810 467 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 EMP2P54851 167 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 LCN6P62502 163 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 TMEM182Q6ZP80 229 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 MRPL10Q7Z7H8 261 aaKnown RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ADGRG3Q86Y34 549 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ZFP62Q8NB50 900 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ESRP2Q9H6T0 727 aaKnown RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 C1GALT1Q9NS00 363 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 BET1LQ9NYM9 111 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 UBR3Q6ZT12 1888 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 LOC100289279A0A1B0GTE1 492 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 FAM72CH0Y354 149 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 HOXA9P31269 272 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 FAM72AQ5TYM5 149 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 FAM72DQ6L9T8 149 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ZNF704Q6ZNC4 412 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ESPNLQ6ZVH7 1005 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 FAM72BQ86X60 149 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 OR13D1Q8NGV5 346 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 UPRTQ96BW1 309 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 NPY6RQ99463 290 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ACOXLQ9NUZ1 547 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 NDUFB11Q9NX14 153 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 BTAF1O14981 1849 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 SCN7AQ01118 1682 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 A0A1W2PPQ1 181 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 PRAMEF27A3QJZ7 478 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ZNF207O43670 478 aaKnown RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 SLURP2P0DP57 97 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 KIR2DL3P43628 341 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 INCA1Q0VD86 236 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ZNF789Q5FWF6 425 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 DACT2Q5SW24 774 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 PRAMEF9Q5VWM5 478 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ANKRD34AQ69YU3 496 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 OR2G2Q8NGZ5 317 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 OR14L1PQ8NHC6 308 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 KCTD13Q8WZ19 329 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 CPNE4Q96A23 557 aaPredicted RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 RPUSD4Q96CM3 377 aaKnown RBP5.27□□□□□ -1.57
CSMD1-215ENST00000537824 PHYHIPLQ96FC7 376 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 SELENOIQ9C0D9 397 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 NXPH3O95157 252 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 FGF4P08620 206 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 SDC1P18827 310 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 OR10A3P58181 314 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 MEP1BQ16820 701 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 CLEC12BQ2HXU8 276 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 ZNF620Q6ZNG0 422 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 GPR20Q99678 358 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 BCO2Q9BYV7 579 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 RHOFQ9HBH0 211 aa5.27□□□□□ -1.57
CSMD1-215ENST00000537824 A0A1W2PNV4 684 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 GPR31O00270 319 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 TRAF3IP2O43734 574 aaPredicted RBP5.26□□□□□ -1.57
CSMD1-215ENST00000537824 SSSCA1O60232 199 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 GASTP01350 101 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 PSMB6P28072 239 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 ZNF154Q13106 437 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 OR2B11Q5JQS5 317 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 RPL22L1Q6P5R6 122 aaKnown RBP5.26□□□□□ -1.57
CSMD1-215ENST00000537824 LRRC25Q8N386 305 aaPredicted RBP5.26□□□□□ -1.57
CSMD1-215ENST00000537824 SECTM1Q8WVN6 248 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 BORCS6Q96GS4 357 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 WRAP73Q9P2S5 460 aaPredicted RBP5.26□□□□□ -1.57
CSMD1-215ENST00000537824 TMEM200CA6NKL6 621 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 SCGB1C2P0DMR2 95 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 TGM1P22735 817 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 THBS2P35442 1172 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 RFC3P40938 356 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 ZNRF4Q8WWF5 429 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 SMIM7Q9BQ49 75 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 C20orf27Q9GZN8 174 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 DMRT3Q9NQL9 472 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 SLC35D1Q9NTN3 355 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 DEC1Q9P2X7 70 aa5.26□□□□□ -1.57
CSMD1-215ENST00000537824 GHRLQ9UBU3 117 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms