RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 CPOQ8IVL8 374 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 DEPDC4Q8N2C3 294 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 RPRMLQ8N4K4 120 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 ARIH2OSQ8N7S6 290 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 NPEPL1Q8NDH3 523 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 SETD9Q8NE22 299 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 OR9Q1Q8NGQ5 310 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 TMEM163Q8TC26 289 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 ZNRF4Q8WWF5 429 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 HDAC2Q92769 488 aaKnown RBP13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 PLEKHA8Q96JA3 519 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 TSSK2Q96PF2 358 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 DDOQ99489 341 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 RHNO1Q9BSD3 238 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 PRRG4Q9BZD6 226 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 CLCF1Q9UBD9 225 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 MCTS1Q9ULC4 181 aaKnown RBP13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 SPTA1P02549 2419 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 EPG5Q9HCE0 2579 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 IGSF10Q6WRI0 2623 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 SVILO95425 2214 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 LOC102725191A0A1B0GVB3 256 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 SLC22A20A6NK97 555 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 RIIAD1A6NNX1 92 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 ENTPD6O75354 484 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 BCL10O95999 233 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 GYPBP06028 91 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 EDNRAP25101 427 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 LGALS3BPQ08380 585 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 ITGADQ13349 1161 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 CAMK2DQ13557 499 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 POU4F3Q15319 338 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 KRT80Q6KB66 452 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 UGT2A3Q6UWM9 527 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 B3GLCTQ6Y288 498 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 PM20D2Q8IYS1 436 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 SYT14Q8NB59 555 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 OR8J1Q8NGP2 316 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 PTP4A1Q93096 173 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 LRR1Q96L50 414 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 NDEL1Q9GZM8 345 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 AMBNQ9NP70 447 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 PAQR5Q9NXK6 330 aaPredicted RBP13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 FLVCR1Q9Y5Y0 555 aa13.92□□□□□ -0.18
SFSWAP-206ENST00000537582 SLC35F4A4IF30 521 aa13.91□□□□□ -0.18
SFSWAP-206ENST00000537582 DCTN6O00399 190 aa13.91□□□□□ -0.18
SFSWAP-206ENST00000537582 IDH3BO43837 385 aa13.91□□□□□ -0.18
SFSWAP-206ENST00000537582 DAP3P51398 398 aaKnown RBP13.91□□□□□ -0.18
SFSWAP-206ENST00000537582 SNRPGP62308 76 aaKnown RBP13.91□□□□□ -0.18
SFSWAP-206ENST00000537582 GPR139Q6DWJ6 353 aa13.91□□□□□ -0.18
SFSWAP-206ENST00000537582 RTL6Q6ICC9 239 aa13.91□□□□□ -0.18
SFSWAP-206ENST00000537582 CXXC5Q7LFL8 322 aaKnown RBP13.91□□□□□ -0.18
SFSWAP-206ENST00000537582 TUSC5Q8IXB3 177 aa13.91□□□□□ -0.18
SFSWAP-206ENST00000537582 ZNF786Q8N393 782 aa13.91□□□□□ -0.18
SFSWAP-206ENST00000537582 C9orf106Q8NAJ2 232 aa13.91□□□□□ -0.18
SFSWAP-206ENST00000537582 FAM57AQ8TBR7 257 aa13.91□□□□□ -0.18
SFSWAP-206ENST00000537582 SGCDQ92629 289 aa13.91□□□□□ -0.18
SFSWAP-206ENST00000537582 ZNF582Q96NG8 517 aaPredicted RBP13.91□□□□□ -0.18
SFSWAP-206ENST00000537582 KALRNO60229 2985 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 FAM171A2A8MVW0 826 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 XPNPEP2O43895 674 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 TRMUO75648 421 aaKnown RBP13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 VAMP5O95183 116 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 ABOP16442 354 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 ZNF3P17036 446 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 ACVR2AP27037 513 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 SELENOPP49908 381 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 SLC16A1P53985 500 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 CACNA1BQ00975 2339 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 FMODQ06828 376 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 AADACL4Q5VUY2 407 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 SEM1Q6ZVN7 128 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 JAZF1Q86VZ6 243 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 GCNT2Q8N0V5 402 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 FAM26EQ8N5C1 309 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 OR51L1Q8NGJ5 315 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 CPT1CQ8TCG5 803 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 WBP1Q96G27 269 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 OR2M2Q96R28 347 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 SF3B5Q9BWJ5 86 aaKnown RBP13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 TEX12Q9BXU0 123 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 PRRG3Q9BZD7 231 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 SYT4Q9H2B2 425 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 CALHM2Q9HA72 323 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 RPRD1BQ9NQG5 326 aaKnown RBP13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 KLHL21Q9UJP4 597 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 ZNF175Q9Y473 711 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 FAM215AQ9Y5M1 114 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 HSPE1-MOB4S4R3N1 261 aa13.9□□□□□ -0.18
SFSWAP-206ENST00000537582 IGKV1D-43A0A0B4J1Z2 117 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 NPIPB13A6NJU9 1138 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 EIF4E1BA6NMX2 242 aaKnown RBP13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 NPIPB4C9JG80 1138 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 IFNGP01579 166 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 PHYHD1Q5SRE7 291 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 C6orf141Q5SZD1 244 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 OTPQ5XKR4 325 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 NIPAL3Q6P499 406 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 LYPD4Q6UWN0 246 aa13.89□□□□□ -0.19
SFSWAP-206ENST00000537582 TMEM123Q8N131 208 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms