RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 CAPS2Q9BXY5 557 aa2.07□□□□□ -2.08
CCDC7-208ENST00000537047 LRRN3Q9H3W5 708 aa2.07□□□□□ -2.08
CCDC7-208ENST00000537047 SPATA7Q9P0W8 599 aa2.07□□□□□ -2.08
CCDC7-208ENST00000537047 CGNQ9P2M7 1197 aaKnown RBP2.07□□□□□ -2.08
CCDC7-208ENST00000537047 XCL2Q9UBD3 114 aa2.07□□□□□ -2.08
CCDC7-208ENST00000537047 ZNF629Q9UEG4 869 aaPredicted RBP2.07□□□□□ -2.08
CCDC7-208ENST00000537047 ZNF229Q9UJW7 825 aa2.07□□□□□ -2.08
CCDC7-208ENST00000537047 N6AMT1Q9Y5N5 214 aa2.07□□□□□ -2.08
CCDC7-208ENST00000537047 PLA2R1Q13018 1463 aa2.07□□□□□ -2.08
CCDC7-208ENST00000537047 FRMPD3Q5JV73 1810 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 IGHV5-51A0A0C4DH38 117 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 TBX19O60806 448 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 KRT13P13646 458 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 TCN1P20061 433 aaPredicted RBP2.06□□□□□ -2.08
CCDC7-208ENST00000537047 DRD5P21918 477 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 QARSP47897 775 aaKnown RBP2.06□□□□□ -2.08
CCDC7-208ENST00000537047 KLHL30Q0D2K2 578 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 STK11Q15831 433 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 CDC37Q16543 378 aaPredicted RBP2.06□□□□□ -2.08
CCDC7-208ENST00000537047 KLHL38Q2WGJ6 581 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 SHISA6Q6ZSJ9 500 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 FAM92BQ6ZTR7 304 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 GET4Q7L5D6 327 aaPredicted RBP2.06□□□□□ -2.08
CCDC7-208ENST00000537047 NEGR1Q7Z3B1 354 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 ZDHHC21Q8IVQ6 265 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 TMEM123Q8N131 208 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 MREGQ8N565 214 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 OR52H1Q8NGJ2 320 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 PYROXD1Q8WU10 500 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 SDR42E1Q8WUS8 393 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 FGF14Q92915 247 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 PDXPQ96GD0 296 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 OR10C1Q96KK4 312 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 TTC25Q96NG3 672 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 SECISBP2Q96T21 854 aaKnown RBP2.06□□□□□ -2.08
CCDC7-208ENST00000537047 RIBC2Q9H4K1 309 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 MCCC2Q9HCC0 563 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 UFSP2Q9NUQ7 469 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 PIPOXQ9P0Z9 390 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 MEMO1Q9Y316 297 aa2.06□□□□□ -2.08
CCDC7-208ENST00000537047 TET2Q6N021 2002 aaPredicted RBP2.06□□□□□ -2.08
CCDC7-208ENST00000537047 RPAP1Q9BWH6 1393 aaPredicted RBP2.06□□□□□ -2.08
CCDC7-208ENST00000537047 MBLAC1A4D2B0 266 aaPredicted RBP2.05□□□□□ -2.08
CCDC7-208ENST00000537047 OR5B21A6NL26 309 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 SLC25A14O95258 325 aaPredicted RBP2.05□□□□□ -2.08
CCDC7-208ENST00000537047 TLX1NBP0CAT3 122 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 RPA2P15927 270 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 RAP1AP62834 184 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 CACNG7P62955 275 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 PRSS8Q16651 343 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 C1orf220Q5T0J3 134 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 NUDCD3Q8IVD9 361 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 ZADH2Q8N4Q0 377 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 ANKFN1Q8N957 763 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 LINC00304Q8N9R0 145 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 OR10G4Q8NGN3 311 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 ZNF461Q8TAF7 563 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 TSSK3Q96PN8 268 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 GABARAPL3Q9BY60 117 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 LINC00597Q9H2U6 94 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 KCNIP3Q9Y2W7 256 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 IGSF9BQ9UPX0 1349 aa2.05□□□□□ -2.08
CCDC7-208ENST00000537047 A0A1B0GWJ7 208 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 XPO1O14980 1071 aaKnown RBP2.04□□□□□ -2.08
CCDC7-208ENST00000537047 MGRN1O60291 552 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 GAPDHP04406 335 aaKnown RBP2.04□□□□□ -2.08
CCDC7-208ENST00000537047 ADRA2AP08913 450 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 PRPS2P11908 318 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 PAX7P23759 505 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 CCR1P32246 355 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 CRYBB1P53674 252 aaPredicted RBP2.04□□□□□ -2.08
CCDC7-208ENST00000537047 SUB1P53999 127 aaKnown RBP eCLIP2.04□□□□□ -2.08
CCDC7-208ENST00000537047 SLC7A9P82251 487 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 KLRB1Q12918 225 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 ERCC8Q13216 396 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 AQP6Q13520 282 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 HES5Q5TA89 166 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 STRADAQ7RTN6 431 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 PEX26Q7Z412 305 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 ECHDC2Q86YB7 292 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 THRSPQ92748 146 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 OXGR1Q96P68 337 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 RBM14Q96PK6 669 aaKnown RBP2.04□□□□□ -2.08
CCDC7-208ENST00000537047 CCT7Q99832 543 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 OSBPL10Q9BXB5 764 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 RAB18Q9NP72 206 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 ZNRD1Q9P1U0 126 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 CHRNA9Q9UGM1 479 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 GGA2Q9UJY4 613 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 PACSIN2Q9UNF0 486 aaPredicted RBP2.04□□□□□ -2.08
CCDC7-208ENST00000537047 POLDIP2Q9Y2S7 368 aa2.04□□□□□ -2.08
CCDC7-208ENST00000537047 MN1Q10571 1320 aaPredicted RBP2.03□□□□□ -2.08
CCDC7-208ENST00000537047 METTL21EPA6NDL7 271 aa2.03□□□□□ -2.08
CCDC7-208ENST00000537047 ZNF705GA8MUZ8 300 aaPredicted RBP2.03□□□□□ -2.08
CCDC7-208ENST00000537047 PRRG1O14668 218 aa2.03□□□□□ -2.08
CCDC7-208ENST00000537047 HSD17B6O14756 317 aa2.03□□□□□ -2.08
CCDC7-208ENST00000537047 UPK3AO75631 287 aa2.03□□□□□ -2.08
CCDC7-208ENST00000537047 B3GALNT1O75752 331 aa2.03□□□□□ -2.08
CCDC7-208ENST00000537047 SRP72O76094 671 aaKnown RBP2.03□□□□□ -2.08
CCDC7-208ENST00000537047 CAPN1P07384 714 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms