RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 PCGF2P35227 344 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 FOXG1P55316 489 aaPredicted RBP6.17□□□□□ -1.42
YBX3-206ENST00000536823 RGS8P57771 180 aaPredicted RBP6.17□□□□□ -1.42
YBX3-206ENST00000536823 MTPNP58546 118 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 NCALDP61601 193 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 NKX6-1P78426 367 aaPredicted RBP6.17□□□□□ -1.42
YBX3-206ENST00000536823 EGR4Q05215 589 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 BSPH1Q075Z2 132 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 NFYCQ13952 458 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 SELPLGQ14242 412 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 CYP51A1Q16850 503 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 TRMT5Q32P41 509 aaKnown RBP6.17□□□□□ -1.42
YBX3-206ENST00000536823 GLIPR1L2Q4G1C9 344 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 CD276Q5ZPR3 534 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 CGB2Q6NT52 195 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 C5orf46Q6UWT4 87 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 ARMC8Q8IUR7 673 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 P3H2Q8IVL5 708 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 SLC30A8Q8IWU4 369 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 LSMEM1Q8N8F7 131 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 ZIC4Q8N9L1 334 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 POMGNT2Q8NAT1 580 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 C1orf162Q8NEQ5 155 aaPredicted RBP6.17□□□□□ -1.42
YBX3-206ENST00000536823 OR52E4Q8NGH9 312 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 MFSD8Q8NHS3 518 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 TMEM171Q8WVE6 324 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 DNAJA4Q8WW22 397 aaPredicted RBP6.17□□□□□ -1.42
YBX3-206ENST00000536823 AKAP1Q92667 903 aaKnown RBP eCLIP6.17□□□□□ -1.42
YBX3-206ENST00000536823 FOXRED1Q96CU9 486 aaPredicted RBP6.17□□□□□ -1.42
YBX3-206ENST00000536823 ZNF385AQ96PM9 386 aaKnown RBP6.17□□□□□ -1.42
YBX3-206ENST00000536823 TRIM2Q9C040 744 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 SLCO5A1Q9H2Y9 848 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 ESRP2Q9H6T0 727 aaKnown RBP6.17□□□□□ -1.42
YBX3-206ENST00000536823 EVA1AQ9H8M9 152 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 SLC7A10Q9NS82 523 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 MRGBPQ9NV56 204 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 FGFR1OP2Q9NVK5 253 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 ADPRHL2Q9NX46 363 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 NPAP1Q9NZP6 1156 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 SLC13A4Q9UKG4 626 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 RASD1Q9Y272 281 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 NDUFAF1Q9Y375 327 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 SLC25A15Q9Y619 301 aa6.17□□□□□ -1.42
YBX3-206ENST00000536823 RTTNQ86VV8 2226 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 IGKV1D-42A0A075B6H8 117 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 A0A0B4J2E0 115 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 A0A1B0GX12 115 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 DPRXA6NFQ7 191 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 BBIP1A8MTZ0 92 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 SHISA9B4DS77 424 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 FXYD1O00168 92 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 FBP2O00757 339 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 FMO6PO60774 539 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 MFN2O95140 757 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 VAMP5O95183 116 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 PNMTP11086 282 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 PAX1P15863 534 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 GTF2E2P29084 291 aaKnown RBP6.16□□□□□ -1.42
YBX3-206ENST00000536823 MPGP29372 298 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 PTH2RP49190 550 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 CDH11P55287 796 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 RPS4XP62701 263 aaKnown RBP6.16□□□□□ -1.42
YBX3-206ENST00000536823 TGFBR3Q03167 851 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 DMTNQ08495 405 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 GABRA6Q16445 453 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 NRF1Q16656 503 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 ZNF672Q499Z4 452 aaPredicted RBP6.16□□□□□ -1.42
YBX3-206ENST00000536823 ALG10BQ5I7T1 473 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 C1QTNF12Q5T7M4 302 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 FAM69AQ5T7M9 428 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 TSPO2Q5TGU0 170 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 FAM91A1Q658Y4 838 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 OR7E24Q6IFN5 339 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 PRSS57Q6UWY2 283 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 AAED1Q7RTV5 226 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 GPAT4Q86UL3 456 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 RANBP3LQ86VV4 465 aaPredicted RBP6.16□□□□□ -1.42
YBX3-206ENST00000536823 C17orf78Q8N4C9 275 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 ADPRHL1Q8NDY3 354 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 KBTBD8Q8NFY9 601 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 GPR32P1Q8NGA4 272 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 OR52N5Q8NH56 324 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 LILRB1Q8NHL6 650 aaPredicted RBP6.16□□□□□ -1.42
YBX3-206ENST00000536823 SLC38A4Q969I6 547 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 KTI12Q96EK9 354 aaPredicted RBP6.16□□□□□ -1.42
YBX3-206ENST00000536823 SLC47A1Q96FL8 570 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 PERPQ96FX8 193 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 CXorf56Q9H5V9 222 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 CCDC134Q9H6E4 229 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 KAT8Q9H7Z6 458 aaKnown RBP6.16□□□□□ -1.42
YBX3-206ENST00000536823 SLC17A5Q9NRA2 495 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 ZNF701Q9NV72 531 aaPredicted RBP6.16□□□□□ -1.42
YBX3-206ENST00000536823 UPB1Q9UBR1 384 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 SPEF1Q9Y4P9 236 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 ATRQ13535 2644 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 ARFGEF3Q5TH69 2177 aa6.16□□□□□ -1.42
YBX3-206ENST00000536823 TRAV36DV7A0A075B6V5 113 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 A0A087WUJ7 227 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 OR6C65A6NJZ3 312 aa6.15□□□□□ -1.42
YBX3-206ENST00000536823 ZNF587BE7ETH6 402 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms