RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 ZNF813Q6ZN06 617 aa12.4□□□□□ -0.42
RTN3P1-201ENST00000536295 PXKQ7Z7A4 578 aa12.4□□□□□ -0.42
RTN3P1-201ENST00000536295 LRRC17Q8N6Y2 441 aa12.4□□□□□ -0.42
RTN3P1-201ENST00000536295 FAM169BQ8N8A8 192 aa12.4□□□□□ -0.42
RTN3P1-201ENST00000536295 ANKS4BQ8N8V4 417 aa12.4□□□□□ -0.42
RTN3P1-201ENST00000536295 OR4F15Q8NGB8 312 aa12.4□□□□□ -0.42
RTN3P1-201ENST00000536295 PROX1Q92786 737 aa12.4□□□□□ -0.42
RTN3P1-201ENST00000536295 LRR1Q96L50 414 aa12.4□□□□□ -0.42
RTN3P1-201ENST00000536295 SORCS2Q96PQ0 1159 aa12.4□□□□□ -0.42
RTN3P1-201ENST00000536295 SH3GL1Q99961 368 aa12.4□□□□□ -0.42
RTN3P1-201ENST00000536295 USP22Q9UPT9 525 aa12.4□□□□□ -0.42
RTN3P1-201ENST00000536295 SH3GLB1Q9Y371 365 aa12.4□□□□□ -0.42
RTN3P1-201ENST00000536295 FKBP7Q9Y680 259 aa12.4□□□□□ -0.42
RTN3P1-201ENST00000536295 ABCA2Q9BZC7 2435 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 ANK3Q12955 4377 aaKnown RBP12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 A0A096LNT2 108 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 IGHV2OR16-5A0A0B4J2B6 119 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 LOC100653049A0A140TA62 436 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 B9A039 149 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 FXYD1O00168 92 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 RNF13O43567 381 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 SHOX2O60902 331 aaPredicted RBP12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 KRT34O76011 436 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 SLC25A16P16260 332 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 THBS4P35443 961 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 CSNK1A1P48729 337 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 MELKQ14680 651 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 DEF8Q6ZN54 512 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 CCDC80Q76M96 950 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 CARM1Q86X55 608 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 SNX32Q86XE0 403 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 OR8J3Q8NGG0 315 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 C10orf105Q8TEF2 133 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 RASSF5Q8WWW0 418 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 TNFRSF13CQ96RJ3 184 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 SAR1AQ9NR31 198 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 NANSQ9NR45 359 aa12.39□□□□□ -0.43
RTN3P1-201ENST00000536295 BBIP1A8MTZ0 92 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 TLX2O43763 284 aaPredicted RBP12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 HIST1H2ABP04908 130 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 CSF3P09919 207 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 GUCY1A3Q02108 690 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 LOXL1Q08397 574 aaPredicted RBP12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 MAPRE2Q15555 327 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 GSG1Q2KHT4 349 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 TMEM249Q2WGJ8 235 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 KRT80Q6KB66 452 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 SLC35D2Q76EJ3 337 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 HIST3H2AQ7L7L0 130 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 SPATA21Q7Z572 469 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 CALHM3Q86XJ0 350 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 CCDC36Q8IYA8 594 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 NUP37Q8NFH4 326 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 HIST1H2ACQ93077 130 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 MS4A3Q96HJ5 214 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 MPP4Q96JB8 637 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 FOXB1Q99853 325 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 PCDHAC1Q9H158 963 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 NOX3Q9HBY0 568 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 ZNF446Q9NWS9 450 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 B3GNT2Q9NY97 397 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 TAS2R5Q9NYW4 299 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 JMJD1CQ15652 2540 aa12.38□□□□□ -0.43
RTN3P1-201ENST00000536295 SH3PXD2BA1X283 911 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 A8MV72 311 aaPredicted RBP12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 BLOC1S5-TXNDC5H3BN57 136 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 hCG_2039718K7EN88 272 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 PDE5AO76074 875 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 NPR2P20594 1047 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 OR1E2P47887 323 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 PTDSS1P48651 473 aaKnown RBP12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 PDLIM4P50479 330 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 TAS2R41P59536 307 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 SNTB2Q13425 540 aaKnown RBP12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 DAG1Q14118 895 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 GGTLC2Q14390 218 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 EFNB3Q15768 340 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 LRRC23Q53EV4 343 aaPredicted RBP12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 COQ5Q5HYK3 327 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 NANOGNBQ7Z5D8 188 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 SVOPLQ8N434 492 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 OR6X1Q8NH79 312 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 PFN4Q8NHR9 129 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 TMEM255BQ8WV15 326 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 C10orf82Q8WW14 230 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 ZNF583Q96ND8 569 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 PRSS27Q9BQR3 290 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 SLC19A3Q9BZV2 496 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 PLK3Q9H4B4 646 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 ZNF442Q9H7R0 627 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 MEPEQ9NQ76 525 aaPredicted RBP12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 MRGBPQ9NV56 204 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 GLTPQ9NZD2 209 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 ZNF229Q9UJW7 825 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 BAG5Q9UL15 447 aa12.37□□□□□ -0.43
RTN3P1-201ENST00000536295 ABCA1O95477 2261 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 DNHD1Q96M86 4753 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 VSTM5A8MXK1 200 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 RAB36O95755 333 aa12.36□□□□□ -0.43
RTN3P1-201ENST00000536295 NPPAP01160 153 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms