RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 TGDSO95455 350 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 RAB36O95755 333 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 C6orf47O95873 294 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 IGHV4-59P01825 116 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 SERPINA5P05154 406 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 LCKP06239 509 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 THRBP10828 461 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 B4GALT1P15291 398 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 LSP1P33241 339 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 WDR4P57081 412 aaKnown RBP6.92□□□□□ -1.3
CLIP1-206ENST00000535290 RFTN2Q52LD8 501 aaPredicted RBP6.92□□□□□ -1.3
CLIP1-206ENST00000535290 ESCO2Q56NI9 601 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 DEFB121Q5J5C9 76 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 TMEM255AQ5JRV8 349 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 FAM209AQ5JX71 171 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 LCE2AQ5TA79 106 aaPredicted RBP6.92□□□□□ -1.3
CLIP1-206ENST00000535290 BTNL3Q6UXE8 466 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 LRRC28Q86X40 367 aaPredicted RBP6.92□□□□□ -1.3
CLIP1-206ENST00000535290 RNF130Q86XS8 419 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 DDIASQ8IXT1 998 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 TMEM123Q8N131 208 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 CLEC4FQ8N1N0 589 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 SLC35F6Q8N357 371 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 KLHL36Q8N4N3 616 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 C11orf44Q8N8P7 122 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 ZNF519Q8TB69 540 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 GEMIN6Q8WXD5 167 aaKnown RBP6.92□□□□□ -1.3
CLIP1-206ENST00000535290 C11orf40Q8WZ69 217 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 OR5P2Q8WZ92 322 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 FCRL1Q96LA6 429 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 OR2M2Q96R28 347 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 TAPBPLQ9BX59 468 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 TOR3AQ9H497 397 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 GSTO2Q9H4Y5 243 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 C1orf109Q9NX04 203 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 B3GAT1Q9P2W7 334 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 IL20RAQ9UHF4 553 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 STK38LQ9Y2H1 464 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 PPP2R2CQ9Y2T4 447 aa6.92□□□□□ -1.3
CLIP1-206ENST00000535290 TET2Q6N021 2002 aaPredicted RBP6.91□□□□□ -1.3
CLIP1-206ENST00000535290 STAB2Q8WWQ8 2551 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 DNAH3Q8TD57 4116 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 IGHV2-70DA0A0C4DH43 119 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 ZSCAN5BA6NJL1 495 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 AK1P00568 194 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 IGHV3-13P01766 116 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 PNMTP11086 282 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 ZNF43P17038 809 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 DRD4P21917 467 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 MATN1P21941 496 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 PRPH2P23942 346 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 CXCR1P25024 350 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 MMP15P51511 669 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 PRKAA2P54646 552 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 RBBP4Q09028 425 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 FUT5Q11128 374 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 CALCOCO2Q13137 446 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 MFSD13AQ14CX5 517 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 HERPUD1Q15011 391 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 ZMYND11Q15326 602 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 CHI3L2Q15782 390 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 FAM153CQ494X1 144 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 TMEM155Q4W5P6 130 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 GPR157Q5UAW9 335 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 C1orf140Q5VVS0 124 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 CARD17Q5XLA6 110 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 C6orf89Q6UWU4 347 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 FRRS1Q6ZNA5 592 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 Q6ZTK2 550 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 ZNF627Q7L945 461 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 C16orf62Q7Z3J2 963 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 C20orf196Q8IYI0 205 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 ICA1LQ8NDH6 482 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 PIK3C3Q8NEB9 887 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 SLC30A7Q8NEW0 376 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 OR2T11Q8NH01 316 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 TBC1D15Q8TC07 691 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 SFXN5Q8TD22 340 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 RAB40AQ8WXH6 277 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 MTERF3Q96E29 417 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 METTL2AQ96IZ6 378 aaKnown RBP6.91□□□□□ -1.3
CLIP1-206ENST00000535290 FN3KRPQ9HA64 309 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.91□□□□□ -1.3
CLIP1-206ENST00000535290 TMEM216Q9P0N5 145 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 ATP6V1HQ9UI12 483 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 TRIM33Q9UPN9 1127 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 WDR45Q9Y484 360 aa6.91□□□□□ -1.3
CLIP1-206ENST00000535290 LOC100996750A0A140TA64 210 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 KIR2DS1A0A191URI9 304 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 DUXAA6NLW8 204 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 CEACAM18A8MTB9 384 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 A8MVM7 634 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 FTCDNL1E5RQL4 147 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 FAAHO00519 579 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 TNFRSF13BO14836 293 aaPredicted RBP6.9□□□□□ -1.3
CLIP1-206ENST00000535290 XPNPEP2O43895 674 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 NPIPB7O75200 414 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 TSPAN9O75954 239 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 MT-ND5P03915 603 aa6.9□□□□□ -1.3
CLIP1-206ENST00000535290 WNT2P09544 360 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms