RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 PRPSAP1Q14558 356 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 MAD2L1BPQ15013 274 aaPredicted RBP-0.08□□□□□ -2.42
COPB1-212ENST00000534771 PON3Q15166 354 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 TYSND1Q2T9J0 566 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 BEND3Q5T5X7 828 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 STUMQ69YW2 141 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 ZFAND6Q6FIF0 208 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 GUSBP11Q6P575 273 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 WDR59Q6PJI9 974 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 CEMP1Q6PRD7 247 aaPredicted RBP-0.08□□□□□ -2.42
COPB1-212ENST00000534771 TMEM270Q6UE05 265 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 ZNF410Q86VK4 478 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 PRSS58Q8IYP2 241 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 ZADH2Q8N4Q0 377 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 SLC35G3Q8N808 338 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 ATP6V0D2Q8N8Y2 350 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 OR5D13Q8NGL4 314 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 GIPC3Q8TF64 312 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 VSTM2LQ96N03 204 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 NAP1L3Q99457 506 aaPredicted RBP-0.08□□□□□ -2.42
COPB1-212ENST00000534771 TBCDQ9BTW9 1192 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 C1orf50Q9BV19 199 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 TMEM59Q9BXS4 323 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 GCOM2Q9BZD3 368 aaPredicted RBP-0.08□□□□□ -2.42
COPB1-212ENST00000534771 SIRPDQ9H106 197 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 RHBGQ9H310 441 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 DUSP21Q9H596 190 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 ZNF442Q9H7R0 627 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 WDR76Q9H967 626 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 EDA2RQ9HAV5 297 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 UGT1A7Q9HAW7 530 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 UGT1A10Q9HAW8 530 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 UGT1A8Q9HAW9 530 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 LY9Q9HBG7 655 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 PALMDQ9NP74 551 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 MYOZ1Q9NP98 299 aaPredicted RBP-0.08□□□□□ -2.42
COPB1-212ENST00000534771 ASF1BQ9NVP2 202 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 RDH8Q9NYR8 311 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 CALYQ9NYX4 217 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 SPATA7Q9P0W8 599 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 SEC14L3Q9UDX4 400 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 KCNN3Q9UGI6 736 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 NPIPA1Q9UND3 350 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 R4GN34 69 aa-0.08□□□□□ -2.42
COPB1-212ENST00000534771 CCDC182A6NF36 153 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 TRDCB7Z8K6 153 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 LGALS8O00214 317 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 MFNGO00587 321 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 CNMDO75829 334 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 B3GAT3O94766 335 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 NDUFB10O96000 172 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 CYB5R3P00387 301 aaPredicted RBP-0.09□□□□□ -2.42
COPB1-212ENST00000534771 OPN1LWP04000 364 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 GAPDHP04406 335 aaKnown RBP-0.09□□□□□ -2.42
COPB1-212ENST00000534771 P0DMU3 169 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 FAM231AP0DMU4 169 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 FAM231CP0DMU5 169 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 COX5AP20674 150 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 DTYMKP23919 212 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 PTGFRP43088 359 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 IDH2P48735 452 aaKnown RBP-0.09□□□□□ -2.42
COPB1-212ENST00000534771 CCR8P51685 355 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 CRYBB1P53674 252 aaPredicted RBP-0.09□□□□□ -2.42
COPB1-212ENST00000534771 RPS14P62263 151 aaKnown RBP-0.09□□□□□ -2.42
COPB1-212ENST00000534771 NUCB1Q02818 461 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 SNX1Q13596 522 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 RCN2Q14257 317 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 TOMM20Q15388 145 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 RGNQ15493 299 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 SLC15A2Q16348 729 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 PHYHD1Q5SRE7 291 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 DNAJC24Q6P3W2 148 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 ZNF546Q86UE3 836 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 OR8H2Q8N162 312 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 ZNF567Q8N184 647 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 TMEM256Q8N2U0 113 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 TMEM185AQ8NFB2 350 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 OR4S2Q8NH73 311 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 FIBINQ8TAL6 211 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 ST7LQ8TDW4 575 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP-0.09□□□□□ -2.42
COPB1-212ENST00000534771 PINX1Q96BK5 328 aaKnown RBP-0.09□□□□□ -2.42
COPB1-212ENST00000534771 TRIM44Q96DX7 344 aaPredicted RBP-0.09□□□□□ -2.42
COPB1-212ENST00000534771 MRPL45Q9BRJ2 306 aaKnown RBP-0.09□□□□□ -2.42
COPB1-212ENST00000534771 SEC22CQ9BRL7 303 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 OSBPL10Q9BXB5 764 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 PARP12Q9H0J9 701 aaKnown RBP-0.09□□□□□ -2.42
COPB1-212ENST00000534771 GBA3Q9H227 469 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 C1orf198Q9H425 327 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 MCCC2Q9HCC0 563 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 EXOSC4Q9NPD3 245 aaKnown RBP-0.09□□□□□ -2.42
COPB1-212ENST00000534771 COMMD8Q9NX08 183 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 EPS15L1Q9UBC2 864 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 PACSIN2Q9UNF0 486 aaPredicted RBP-0.09□□□□□ -2.42
COPB1-212ENST00000534771 YARS2Q9Y2Z4 477 aaKnown RBP-0.09□□□□□ -2.42
COPB1-212ENST00000534771 IKBKGQ9Y6K9 419 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 FAT4Q6V0I7 4981 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 CARMIL1Q5VZK9 1371 aa-0.09□□□□□ -2.42
COPB1-212ENST00000534771 DHX29Q7Z478 1369 aaKnown RBP-0.09□□□□□ -2.42
COPB1-212ENST00000534771 DSTQ03001 7570 aaKnown RBP-0.1□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms