RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 EOGTQ5NDL2 527 aa8.28□□□□□ -1.08
SF3B2-216ENST00000534765 CPTPQ5TA50 214 aa8.28□□□□□ -1.08
SF3B2-216ENST00000534765 RPL13AP3Q6NVV1 102 aa8.28□□□□□ -1.08
SF3B2-216ENST00000534765 OR4N5Q8IXE1 308 aa8.28□□□□□ -1.08
SF3B2-216ENST00000534765 PROKR2Q8NFJ6 384 aa8.28□□□□□ -1.08
SF3B2-216ENST00000534765 OR5M9Q8NGP3 310 aa8.28□□□□□ -1.08
SF3B2-216ENST00000534765 GPBAR1Q8TDU6 330 aa8.28□□□□□ -1.08
SF3B2-216ENST00000534765 SETD7Q8WTS6 366 aaKnown RBP8.28□□□□□ -1.08
SF3B2-216ENST00000534765 ZG16BQ96DA0 208 aa8.28□□□□□ -1.08
SF3B2-216ENST00000534765 ZC3HAV1LQ96H79 300 aaKnown RBP8.28□□□□□ -1.08
SF3B2-216ENST00000534765 AMDHD1Q96NU7 426 aa8.28□□□□□ -1.08
SF3B2-216ENST00000534765 CLCC1Q96S66 551 aa8.28□□□□□ -1.08
SF3B2-216ENST00000534765 RGCCQ9H4X1 137 aa8.28□□□□□ -1.08
SF3B2-216ENST00000534765 TCF7L1Q9HCS4 588 aa8.28□□□□□ -1.08
SF3B2-216ENST00000534765 CNOT2Q9NZN8 540 aaKnown RBP8.28□□□□□ -1.08
SF3B2-216ENST00000534765 LAMP5Q9UJQ1 280 aa8.28□□□□□ -1.08
SF3B2-216ENST00000534765 DTX4Q9Y2E6 619 aa8.28□□□□□ -1.08
SF3B2-216ENST00000534765 KCNIP3Q9Y2W7 256 aa8.28□□□□□ -1.08
SF3B2-216ENST00000534765 DMRT1Q9Y5R6 373 aa8.28□□□□□ -1.08
SF3B2-216ENST00000534765 A0A1W2PPC4 97 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 PRSS47A8MTI9 375 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 MPTX1A8MV57 137 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 ZNF432O94892 652 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 IGHV2-70P01814 119 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 UBBP0CG47 229 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 F3P13726 295 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 RNF144AP50876 292 aaPredicted RBP8.27□□□□□ -1.08
SF3B2-216ENST00000534765 MECP2P51608 486 aaKnown RBP8.27□□□□□ -1.08
SF3B2-216ENST00000534765 CCR8P51685 355 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 AFF3P51826 1226 aaKnown RBP8.27□□□□□ -1.08
SF3B2-216ENST00000534765 SIM1P81133 766 aaPredicted RBP8.27□□□□□ -1.08
SF3B2-216ENST00000534765 PLA1AQ53H76 456 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 C3orf38Q5JPI3 329 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 NKAIN2Q5VXU1 208 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 CEACAM20Q6UY09 585 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 DGAT2L6Q6ZPD8 337 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 PGAP1Q75T13 922 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 FAM24BQ8N5W8 94 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 DEFB123Q8N688 67 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 CCDC54Q8NEL0 328 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 OR4F15Q8NGB8 312 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 RAB8BQ92930 207 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 OR2A5Q96R48 311 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 MESP1Q9BRJ9 268 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 EDEM2Q9BV94 578 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 SIRT7Q9NRC8 400 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 TREM2Q9NZC2 230 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 PILRAQ9UKJ1 303 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 TMEM184BQ9Y519 407 aaPredicted RBP8.27□□□□□ -1.08
SF3B2-216ENST00000534765 URGCP-MRPS24S4R325 110 aa8.27□□□□□ -1.08
SF3B2-216ENST00000534765 SGK494L7N484 410 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 PSMB1P20618 241 aaKnown RBP8.27□□□□□ -1.09
SF3B2-216ENST00000534765 RPL3P39023 403 aaKnown RBP8.27□□□□□ -1.09
SF3B2-216ENST00000534765 OMPP47874 163 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 CFHR1Q03591 330 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 HSPB3Q12988 150 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 PLK5Q496M5 336 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 PRAMEF17Q5VTA0 474 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 CEACAM19Q7Z692 300 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 MAML2Q8IZL2 1156 aaPredicted RBP8.27□□□□□ -1.09
SF3B2-216ENST00000534765 HORMAD2Q8N7B1 307 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 OR10H4Q8NGA5 316 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 DUSP19Q8WTR2 217 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 C14orf144Q96I85 54 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 DOHHQ9BU89 302 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 PARP12Q9H0J9 701 aaKnown RBP8.27□□□□□ -1.09
SF3B2-216ENST00000534765 PIGMQ9H3S5 423 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 C1GALT1Q9NS00 363 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 THSD1Q9NS62 852 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 CHST2Q9Y4C5 530 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 PCDHB11Q9Y5F2 797 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 SLC9B1P1A6NJY1 282 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 HYAL3O43820 417 aaPredicted RBP8.27□□□□□ -1.09
SF3B2-216ENST00000534765 SLC28A2O43868 658 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 OR2T1O43869 369 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 PRKNO60260 465 aaPredicted RBP8.27□□□□□ -1.09
SF3B2-216ENST00000534765 RGS9O75916 674 aaPredicted RBP8.27□□□□□ -1.09
SF3B2-216ENST00000534765 ARHGAP19Q14CB8 494 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 LIPNQ5VXI9 398 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 RBM45Q8IUH3 476 aaKnown RBP8.27□□□□□ -1.09
SF3B2-216ENST00000534765 CCDC116Q8IYX3 515 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 ZNF561Q8N587 486 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 INO80EQ8NBZ0 244 aaPredicted RBP8.27□□□□□ -1.09
SF3B2-216ENST00000534765 ACBD4Q8NC06 268 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 SEMA6DQ8NFY4 1073 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 LCN9Q8WX39 176 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 HS6ST2Q96MM7 605 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 PRR14Q9BWN1 585 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 TSPAN10Q9H1Z9 355 aaPredicted RBP8.27□□□□□ -1.09
SF3B2-216ENST00000534765 EXO5Q9H790 373 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 SLC13A4Q9UKG4 626 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 CES1P1Q9UKY3 287 aa8.27□□□□□ -1.09
SF3B2-216ENST00000534765 NOP16Q9Y3C1 178 aaKnown RBP8.27□□□□□ -1.09
SF3B2-216ENST00000534765 A0A0A6YYC8 382 aaPredicted RBP8.26□□□□□ -1.09
SF3B2-216ENST00000534765 C13orf42A0A1B0GVH6 325 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 A0A1W2PPH5 198 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 TGFBR3LH3BV60 316 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 I3L1I5 382 aaPredicted RBP8.26□□□□□ -1.09
SF3B2-216ENST00000534765 ARG1P05089 322 aa8.26□□□□□ -1.09
SF3B2-216ENST00000534765 SNRPCP09234 159 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms