RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 FAM91A1Q658Y4 838 aa11.92□□□□□ -0.5
CCDC84-208ENST00000534656 ULK3Q6PHR2 472 aa11.92□□□□□ -0.5
CCDC84-208ENST00000534656 SNX32Q86XE0 403 aa11.92□□□□□ -0.5
CCDC84-208ENST00000534656 WDFY1Q8IWB7 410 aa11.92□□□□□ -0.5
CCDC84-208ENST00000534656 SCAIQ8N9R8 606 aa11.92□□□□□ -0.5
CCDC84-208ENST00000534656 OR9I1Q8NGQ6 314 aa11.92□□□□□ -0.5
CCDC84-208ENST00000534656 YIPF5Q969M3 257 aa11.92□□□□□ -0.5
CCDC84-208ENST00000534656 SLC47A1Q96FL8 570 aa11.92□□□□□ -0.5
CCDC84-208ENST00000534656 TXNDC15Q96J42 360 aa11.92□□□□□ -0.5
CCDC84-208ENST00000534656 FOXB1Q99853 325 aa11.92□□□□□ -0.5
CCDC84-208ENST00000534656 ASPNQ9BXN1 380 aa11.92□□□□□ -0.5
CCDC84-208ENST00000534656 ULBP2Q9BZM5 246 aa11.92□□□□□ -0.5
CCDC84-208ENST00000534656 LPAR2Q9HBW0 351 aa11.92□□□□□ -0.5
CCDC84-208ENST00000534656 ZNF275Q9NSD4 429 aaPredicted RBP11.92□□□□□ -0.5
CCDC84-208ENST00000534656 MED29Q9NX70 200 aa11.92□□□□□ -0.5
CCDC84-208ENST00000534656 MYEF2Q9P2K5 600 aaKnown RBP11.92□□□□□ -0.5
CCDC84-208ENST00000534656 ZNF726A6NNF4 738 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 WNT9BO14905 357 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 UBDO15205 165 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 SPRY1O43609 319 aaPredicted RBP11.91□□□□□ -0.5
CCDC84-208ENST00000534656 RAB36O95755 333 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 GAAP10253 952 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 B4GALT1P15291 398 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 HOXB9P17482 250 aaPredicted RBP11.91□□□□□ -0.5
CCDC84-208ENST00000534656 GIPRP48546 466 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 WDR4P57081 412 aaKnown RBP11.91□□□□□ -0.5
CCDC84-208ENST00000534656 LMO4P61968 165 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 MRPS11P82912 194 aaKnown RBP11.91□□□□□ -0.5
CCDC84-208ENST00000534656 GALK2Q01415 458 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 PMS2P3Q13401 168 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 CAMK2DQ13557 499 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 DHRS4L2Q6PKH6 230 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 COMTD1Q86VU5 262 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 ANKRD42Q8N9B4 389 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 OR6N1Q8NGY5 312 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 OR51F2Q8NH61 342 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 MGARPQ8TDB4 240 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 ZNF418Q8TF45 676 aaPredicted RBP11.91□□□□□ -0.5
CCDC84-208ENST00000534656 LRRC37BQ96QE4 947 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 EPYCQ99645 322 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 ZNF385DQ9H6B1 395 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 MRPL39Q9NYK5 338 aaKnown RBP11.91□□□□□ -0.5
CCDC84-208ENST00000534656 TREM2Q9NZC2 230 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 FBXL3Q9UKT7 428 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 FZR1Q9UM11 496 aa11.91□□□□□ -0.5
CCDC84-208ENST00000534656 PPIHO43447 177 aaKnown RBP11.9□□□□□ -0.5
CCDC84-208ENST00000534656 WIPF1O43516 503 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 TPST1O60507 370 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 NCR1O76036 304 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 UBL3O95164 117 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 ARAFP10398 606 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 COMPP49747 757 aaPredicted RBP11.9□□□□□ -0.5
CCDC84-208ENST00000534656 ACTG1P63261 375 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 PUDPQ08623 228 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 RAB39AQ14964 217 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 GLIPR1L2Q4G1C9 344 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 CEP85LQ5SZL2 805 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 SHQ1Q6PI26 577 aaKnown RBP11.9□□□□□ -0.5
CCDC84-208ENST00000534656 SLC2A7Q6PXP3 512 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 PIWIL3Q7Z3Z3 882 aaKnown RBP11.9□□□□□ -0.5
CCDC84-208ENST00000534656 PXKQ7Z7A4 578 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 MIER2Q8N344 545 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 NFKBIDQ8NI38 313 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 RNF217Q8TC41 542 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 TRIM44Q96DX7 344 aaPredicted RBP11.9□□□□□ -0.5
CCDC84-208ENST00000534656 MOGAT1Q96PD6 335 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 OR52B2Q96RD2 323 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 SPATA5L1Q9BVQ7 753 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 ZNF416Q9BWM5 594 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 SELENONQ9NZV5 590 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 TESQ9UGI8 421 aaKnown RBP11.9□□□□□ -0.5
CCDC84-208ENST00000534656 SLC7A8Q9UHI5 535 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 DUSP13Q9UII6 198 aa11.9□□□□□ -0.5
CCDC84-208ENST00000534656 ZNF346Q9UL40 294 aaKnown RBP11.9□□□□□ -0.5
CCDC84-208ENST00000534656 TRAV20A0A0B4J274 112 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 A0A0B4J2E0 115 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 A0A1B0GX12 115 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 TMEM89A2RUT3 159 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 PLPP3O14495 311 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 RP2O75695 350 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 SERPINA5P05154 406 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 NAT2P11245 290 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 LSP1P33241 339 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 NCALDP61601 193 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 MYBPC1Q00872 1141 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 OR1Q1Q15612 314 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 REEP3Q6NUK4 255 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 FAHD2BQ6P2I3 314 aaPredicted RBP11.89□□□□□ -0.51
CCDC84-208ENST00000534656 THSD4Q6ZMP0 1018 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 USP43Q70EL4 1123 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 MAVSQ7Z434 540 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 KRT73Q86Y46 540 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 ZNF584Q8IVC4 421 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 SKA3Q8IX90 412 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 GOLGA6L1Q8N7Z2 621 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 FGFBP3Q8TAT2 258 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 FAM216AQ8WUB2 273 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 ZBTB9Q96C00 473 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 FAHD2AQ96GK7 314 aa11.89□□□□□ -0.51
CCDC84-208ENST00000534656 TMEM27Q9HBJ8 222 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms