RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 SCYL2Q6P3W7 929 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 FAM173BQ6P4H8 233 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 SCARA5Q6ZMJ2 495 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 LRRC70Q7Z2Q7 622 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 TRPM8Q7Z2W7 1104 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 ACOT1Q86TX2 421 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 GCNT2Q8N0V5 402 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 LRRC52Q8N7C0 313 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 WFDC5Q8TCV5 224 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 FGF11Q92914 225 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 CCDC127Q96BQ5 260 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 MED10Q9BTT4 135 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 FICDQ9BVA6 458 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 NUP58Q9BVL2 599 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 TIPINQ9BVW5 301 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 NMUR2Q9GZQ4 415 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 PRSS16Q9NQE7 514 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 FAM49BQ9NUQ9 324 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 IL37Q9NZH6 218 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 ACTR3BQ9P1U1 418 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 ANKMY1Q9P2S6 941 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 SPRR3Q9UBC9 169 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 SAMD4AQ9UPU9 718 aaKnown RBP4.46□□□□□ -1.7
CASP4-213ENST00000534356 RNF6Q9Y252 685 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 PPIAL4AQ9Y536 164 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 LRRK2Q5S007 2527 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 USP9YO00507 2555 aaPredicted RBP4.46□□□□□ -1.7
CASP4-213ENST00000534356 SDK2Q58EX2 2172 aa4.46□□□□□ -1.7
CASP4-213ENST00000534356 GOLGA6L7A0A1B0GV03 622 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 A8MXQ7 604 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 F8WDY8 70 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 DUX1O43812 170 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 IGLV3-19P01714 112 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 CD1EP15812 388 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 ADORA2BP29275 332 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 CASP1P29466 404 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 PRPHP41219 470 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 STARP49675 285 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 BCL2L1Q07817 233 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 ORC2Q13416 577 aaPredicted RBP4.45□□□□□ -1.7
CASP4-213ENST00000534356 CHI3L2Q15782 390 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 LINC00303Q3SY05 128 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 OR5M10Q6IEU7 315 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 SPOPLQ6IQ16 392 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 SLC25A45Q8N413 288 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 C14orf178Q8N769 122 aaPredicted RBP4.45□□□□□ -1.7
CASP4-213ENST00000534356 Q8N7P7 452 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 OR5AU1Q8NGC0 362 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 LINC01006Q8NI28 216 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 M1APQ8TC57 530 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 SLC2A14Q8TDB8 520 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 TRUB1Q8WWH5 349 aaKnown RBP4.45□□□□□ -1.7
CASP4-213ENST00000534356 VPS35Q96QK1 796 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 XPO6Q96QU8 1125 aaKnown RBP4.45□□□□□ -1.7
CASP4-213ENST00000534356 NEUROG2Q9H2A3 272 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 CYTH4Q9UIA0 394 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 CRLS1Q9UJA2 301 aa4.45□□□□□ -1.7
CASP4-213ENST00000534356 SPTBN1Q01082 2364 aaKnown RBP4.45□□□□□ -1.7
CASP4-213ENST00000534356 UNC13CQ8NB66 2214 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 FAM92AA1XBS5 289 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 DHRS7CA6NNS2 312 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 H0YCG3 227 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 RRP8O43159 456 aaKnown RBP4.44□□□□□ -1.7
CASP4-213ENST00000534356 EFNA2O43921 213 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 SCGB2A1O75556 95 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 GPX5O75715 221 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 OR4F21O95013 312 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 TNNC2P02585 160 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 GIMD1P0DJR0 217 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 CD70P32970 193 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 MRPS11P82912 194 aaKnown RBP4.44□□□□□ -1.7
CASP4-213ENST00000534356 ST3GAL3Q11203 375 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 PDZK1IP1Q13113 114 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 IGFBP7Q16270 282 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 INAQ16352 499 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 LINC01620Q4KN68 170 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 ZNF311Q5JNZ3 666 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 OR2B11Q5JQS5 317 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 C10orf120Q5SQS8 335 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 NIPAL3Q6P499 406 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 TFAP2EQ6VUC0 442 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 KRTAP11-1Q8IUC1 163 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 FAM184AQ8NB25 1140 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 OR2T3Q8NH03 318 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 CNIH3Q8TBE1 160 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 KLK6Q92876 244 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 HAVCR1Q96D42 359 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 OTUB2Q96DC9 234 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 C16orf74Q96GX8 76 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 TECTBQ96PL2 329 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 RAB34Q9BZG1 259 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 LHX5Q9H2C1 402 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 RHOJQ9H4E5 214 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 CAB39LQ9H9S4 337 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 RDH8Q9NYR8 311 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 B9D1Q9UPM9 204 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 MYO9AB2RTY4 2548 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 ITPR2Q14571 2701 aa4.44□□□□□ -1.7
CASP4-213ENST00000534356 ABCA12Q86UK0 2595 aa4.43□□□□□ -1.7
CASP4-213ENST00000534356 C10orf142B7Z368 130 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms