RNA–Protein interactions for RNA: ENST00000534296.5

CD44-238, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-238ENST00000534296 TMEM179Q6ZVK1 233 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 CENPQQ7L2Z9 268 aaPredicted RBP1.82□□□□□ -2.12
CD44-238ENST00000534296 TRIM69Q86WT6 500 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 EGFL6Q8IUX8 553 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 MFSD6LQ8IWD5 586 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 MREGQ8N565 214 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 EID2Q8N6I1 236 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 TPRX1Q8N7U7 411 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 OR2G3Q8NGZ4 309 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 AKR7LQ8NHP1 331 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 RHEBL1Q8TAI7 183 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 PIBF1Q8WXW3 757 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 MYDGFQ969H8 173 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 TUBGCP3Q96CW5 907 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 MED8Q96G25 268 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 FOPNLQ96NB1 174 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 PLEKHF1Q96S99 279 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 MYCBPQ99417 103 aaPredicted RBP1.82□□□□□ -2.12
CD44-238ENST00000534296 CENPKQ9BS16 269 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 CHRDL1Q9BU40 450 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 OSBPL10Q9BXB5 764 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 TMEM59Q9BXS4 323 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 SLC25A39Q9BZJ4 359 aaPredicted RBP1.82□□□□□ -2.12
CD44-238ENST00000534296 ILKAPQ9H0C8 392 aaPredicted RBP1.82□□□□□ -2.12
CD44-238ENST00000534296 C20orf85Q9H1P6 137 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 ANKRD19PQ9H560 264 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 NIPAL2Q9H841 368 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 ZNF226Q9NYT6 803 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 CALYQ9NYX4 217 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 SLC25A37Q9NYZ2 338 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 OR12D3Q9UGF7 316 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 KLK12Q9UKR0 248 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 RAB26Q9ULW5 256 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 NEUROG3Q9Y4Z2 214 aa1.82□□□□□ -2.12
CD44-238ENST00000534296 IGKV6-21A0A0C4DH24 114 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 A0A0U1RQS6 177 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 CCDC169A6NNP5 214 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 UBXN8O00124 270 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 PES1O00541 588 aaKnown RBP1.81□□□□□ -2.12
CD44-238ENST00000534296 CCL21O00585 134 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 AIM2O14862 343 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 UPK3AO75631 287 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 OR7A10O76100 309 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 GAPDHP04406 335 aaKnown RBP1.81□□□□□ -2.12
CD44-238ENST00000534296 PSG2P11465 335 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 ATP1B2P14415 290 aaPredicted RBP1.81□□□□□ -2.12
CD44-238ENST00000534296 ETS2P15036 469 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 NPR2P20594 1047 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 RRM2P31350 389 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 TAGLN2P37802 199 aaKnown RBP1.81□□□□□ -2.12
CD44-238ENST00000534296 OPRD1P41143 372 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 CRYBB2P43320 205 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 GPR6P46095 362 aaPredicted RBP1.81□□□□□ -2.12
CD44-238ENST00000534296 RFX3P48380 749 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 NMUP48645 174 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 CYB561P49447 251 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 SUCLG1P53597 346 aaKnown RBP1.81□□□□□ -2.12
CD44-238ENST00000534296 RPS14P62263 151 aaKnown RBP1.81□□□□□ -2.12
CD44-238ENST00000534296 ACTA1P68133 377 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 MRPS22P82650 360 aaKnown RBP1.81□□□□□ -2.12
CD44-238ENST00000534296 PAX5Q02548 391 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 TWF1Q12792 350 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 CLINT1Q14677 625 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 KIAA0087Q14695 138 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 DGUOKQ16854 277 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 PIGGQ5H8A4 983 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 AGBL2Q5U5Z8 902 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 LCN12Q6JVE5 192 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 RNASEKQ6P5S7 137 aaKnown RBP1.81□□□□□ -2.12
CD44-238ENST00000534296 UQCC3Q6UW78 93 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 TMEM107Q6UX40 140 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 LINC01551Q86U37 167 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 TMEM135Q86UB9 458 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 RALGPS2Q86X27 583 aaPredicted RBP1.81□□□□□ -2.12
CD44-238ENST00000534296 PSTKQ8IV42 348 aaKnown RBP1.81□□□□□ -2.12
CD44-238ENST00000534296 PRSS58Q8IYP2 241 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 C6orf223Q8N319 242 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 LIX1Q8N485 282 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 MDS2Q8NDY4 140 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 OR4F15Q8NGB8 312 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 OR56B2PQ8NGI1 322 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 OR8J1Q8NGP2 316 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 OR1L6Q8NGR2 347 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 KCNG3Q8TAE7 436 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 SLC2A14Q8TDB8 520 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 GPR151Q8TDV0 419 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 DNAJC19Q96DA6 116 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 STARD4Q96DR4 205 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 CCDC126Q96EE4 140 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 NPY6RQ99463 290 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 SH3GL1Q99961 368 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 SH3GL3Q99963 347 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 RARRES2Q99969 163 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 GPR61Q9BZJ8 451 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 FAM192AQ9GZU8 254 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 IFI27L2Q9H2X8 130 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 ZFP14Q9HCL3 533 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 ZNF331Q9NQX6 463 aaPredicted RBP1.81□□□□□ -2.12
CD44-238ENST00000534296 CTPS2Q9NRF8 586 aa1.81□□□□□ -2.12
CD44-238ENST00000534296 FAM49BQ9NUQ9 324 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms