RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 NANOGP1Q8N7R0 232 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 OR6S1Q8NH40 331 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 LIN37Q96GY3 246 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 NXF5Q9H1B4 397 aaKnown RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 KIR3DX1Q9H7L2 352 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 PRDM9Q9NQV7 894 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 DNMT3BQ9UBC3 853 aaKnown RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 LHX6Q9UPM6 363 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 USP22Q9UPT9 525 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 MRPS28Q9Y2Q9 187 aaKnown RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 TIMM8BQ9Y5J9 83 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 OTOL1A6NHN0 477 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 ACOD1A6NK06 481 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 NUDT19A8MXV4 375 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 H3BNC9 293 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 SOCS7O14512 581 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 ABLIM3O94929 683 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 THBS1P07996 1170 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 CALCBP10092 127 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 NPPBP16860 134 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 SHC1P29353 583 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 SSTR2P30874 369 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 OR1D4P47884 311 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 ARG2P78540 354 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 PLGLAQ15195 96 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 ABLIM2Q6H8Q1 611 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 STEAP1BQ6NZ63 245 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 FAM111BQ6SJ93 734 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 IL20RBQ6UXL0 311 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 DLEU7Q6UYE1 221 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 NPSR1Q6W5P4 371 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 FAM122BQ7Z309 247 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 SMIM14Q96QK8 99 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 LYSMD1Q96S90 227 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 MAP3K3Q99759 626 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 SEMA4CQ9C0C4 833 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 HIPK2Q9H2X6 1198 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 KCNIP2Q9NS61 270 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 GPATCH2Q9NW75 528 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 THAP10Q9P2Z0 257 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 NUMBLQ9Y6R0 609 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 TMED7-TICAM2A0A0A6YYA0 188 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 PRAMEF27A3QJZ7 478 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 CEBPZOSA8MTT3 80 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 ZNF705GA8MUZ8 300 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 A8MVM7 634 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 TNFRSF10CO14798 259 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 GJB3O75712 270 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 NCR1O76036 304 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 UTS2O95399 124 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 RAF1P04049 648 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 KIAA1024LP59773 190 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 ISL1P61371 349 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 CSNK1G2P78368 415 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 CRMP1Q14194 572 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 ZNF266Q14584 549 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 ADPRMQ3LIE5 342 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 ZMAT1Q5H9K5 638 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 PRAMEF9Q5VWM5 478 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 CLRN3Q8NCR9 226 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 PIGCQ92535 297 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 RBMXL1Q96E39 390 aaKnown RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 GPR78Q96P69 363 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 UHRF2Q96PU4 802 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 OR5M11Q96RB7 305 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 NIPSNAP1Q9BPW8 284 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 GABARAPL3Q9BY60 117 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 UBQLN3Q9H347 655 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 HRH4Q9H3N8 390 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 ACKR4Q9NPB9 350 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 ZNF230Q9UIE0 474 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 TMED7Q9Y3B3 224 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 HS3ST3A1Q9Y663 406 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 RGPD2P0DJD1 1756 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 MAST2Q6P0Q8 1798 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 A0A087WUU8 490 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 ARRDC5A6NEK1 342 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 HSPB2A8KAH6 182 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 BET1O15155 118 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 FABP7O15540 132 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 GLSO94925 669 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 SNRNP70P08621 437 aaKnown RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 HOXB1P14653 301 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 CD46P15529 392 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 S100A11P31949 105 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 MAGEB1P43366 347 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 HTR5AP47898 357 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 MTCP1P56278 107 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 RPS18P62269 152 aaKnown RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 GRB2P62993 217 aaKnown RBP6.48□□□□□ -1.37
CTNND1-236ENST00000533667 BDH1Q02338 343 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 MFAP5Q13361 173 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 HSPB2Q16082 182 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 SLC36A2Q495M3 483 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 FAM78AQ5JUQ0 283 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 AFMIDQ63HM1 303 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 BRICD5Q6PL45 260 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 FBXW12Q6X9E4 464 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 FAM26EQ8N5C1 309 aa6.48□□□□□ -1.37
CTNND1-236ENST00000533667 LINC01465Q8N7H1 131 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms