RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 SERPINA12Q8IW75 414 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 ZNF100Q8IYN0 542 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 SLC38A9Q8NBW4 561 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 KIAA0895Q8NCT3 520 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 FBXL13Q8NEE6 735 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 OR10W1Q8NGF6 305 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 OR52E4Q8NGH9 312 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 OR11L1Q8NGX0 322 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 HPSE2Q8WWQ2 592 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 SMARCD2Q92925 531 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 ADIPOR1Q96A54 375 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 ZNF707Q96C28 371 aaPredicted RBP5.01□□□□□ -1.61
CD44-236ENST00000533222 SLC41A3Q96GZ6 507 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 CELF6Q96J87 481 aaKnown RBP5.01□□□□□ -1.61
CD44-236ENST00000533222 OR5B12Q96R08 314 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 PCYT2Q99447 389 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 KLHDC3Q9BQ90 382 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 REEP2Q9BRK0 252 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 NICN1Q9BSH3 213 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 TBL1XR1Q9BZK7 514 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 ULBP1Q9BZM6 244 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 TKTL2Q9H0I9 626 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 SYT4Q9H2B2 425 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 TOR3AQ9H497 397 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 SFXN1Q9H9B4 322 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 ADGRL4Q9HBW9 690 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 SLC25A19Q9HC21 320 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 MMP25Q9NPA2 562 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 ACOT13Q9NPJ3 140 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 IL17RBQ9NRM6 502 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 TMEM74BQ9NUR3 256 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 MRPL15Q9P015 296 aaKnown RBP5.01□□□□□ -1.61
CD44-236ENST00000533222 IL17CQ9P0M4 197 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 C5AR2Q9P296 337 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 MARCH4Q9P2E8 410 aaPredicted RBP5.01□□□□□ -1.61
CD44-236ENST00000533222 HACL1Q9UJ83 578 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 FBXL4Q9UKA2 621 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 IKZF3Q9UKT9 509 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 PADI1Q9ULC6 663 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 SAMD4AQ9UPU9 718 aaKnown RBP5.01□□□□□ -1.61
CD44-236ENST00000533222 DRG1Q9Y295 367 aaKnown RBP5.01□□□□□ -1.61
CD44-236ENST00000533222 B3GALT5Q9Y2C3 310 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 TBL2Q9Y4P3 447 aaKnown RBP5.01□□□□□ -1.61
CD44-236ENST00000533222 DOCK2Q92608 1830 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 KDM3BQ7LBC6 1761 aa5.01□□□□□ -1.61
CD44-236ENST00000533222 DIP2CQ9Y2E4 1556 aa5□□□□□ -1.61
CD44-236ENST00000533222 C3P01024 1663 aa5□□□□□ -1.61
CD44-236ENST00000533222 DLG5Q8TDM6 1919 aa5□□□□□ -1.61
CD44-236ENST00000533222 TRGV11A0A075B6L2 103 aa5□□□□□ -1.61
CD44-236ENST00000533222 TRAV30A0A087WSZ9 112 aa5□□□□□ -1.61
CD44-236ENST00000533222 KCNE1BA0A087WTH5 132 aa5□□□□□ -1.61
CD44-236ENST00000533222 TRAV25A0A0B4J276 109 aa5□□□□□ -1.61
CD44-236ENST00000533222 OR5H15A6NDH6 313 aa5□□□□□ -1.61
CD44-236ENST00000533222 CD8B2A6NJW9 211 aa5□□□□□ -1.61
CD44-236ENST00000533222 OR5H1A6NKK0 313 aa5□□□□□ -1.61
CD44-236ENST00000533222 ZNF724A8MTY0 619 aa5□□□□□ -1.61
CD44-236ENST00000533222 M0R036 132 aa5□□□□□ -1.61
CD44-236ENST00000533222 FAAHO00519 579 aa5□□□□□ -1.61
CD44-236ENST00000533222 CASKO14936 926 aa5□□□□□ -1.61
CD44-236ENST00000533222 SCAMP2O15127 329 aaKnown RBP5□□□□□ -1.61
CD44-236ENST00000533222 ARPC3O15145 178 aa5□□□□□ -1.61
CD44-236ENST00000533222 PLA2G10O15496 165 aa5□□□□□ -1.61
CD44-236ENST00000533222 EMC8O43402 210 aa5□□□□□ -1.61
CD44-236ENST00000533222 STK16O75716 305 aa5□□□□□ -1.61
CD44-236ENST00000533222 ATP6AP2O75787 350 aa5□□□□□ -1.61
CD44-236ENST00000533222 VAMP5O95183 116 aa5□□□□□ -1.61
CD44-236ENST00000533222 METTL18O95568 372 aa5□□□□□ -1.61
CD44-236ENST00000533222 CXCL14O95715 111 aa5□□□□□ -1.61
CD44-236ENST00000533222 PDYNP01213 254 aa5□□□□□ -1.61
CD44-236ENST00000533222 HLA-DOAP06340 250 aa5□□□□□ -1.61
CD44-236ENST00000533222 RHOP08100 348 aa5□□□□□ -1.61
CD44-236ENST00000533222 HNRNPA1P09651 372 aaKnown RBP eCLIP5□□□□□ -1.61
CD44-236ENST00000533222 UCHL1P09936 223 aa5□□□□□ -1.61
CD44-236ENST00000533222 OR10J4P0C629 311 aa5□□□□□ -1.61
CD44-236ENST00000533222 IL1RNP18510 177 aa5□□□□□ -1.61
CD44-236ENST00000533222 MAKP20794 623 aa5□□□□□ -1.61
CD44-236ENST00000533222 NFYAP23511 347 aaPredicted RBP5□□□□□ -1.61
CD44-236ENST00000533222 PSMA1P25786 263 aaKnown RBP5□□□□□ -1.61
CD44-236ENST00000533222 UCP1P25874 307 aa5□□□□□ -1.61
CD44-236ENST00000533222 TM4SF1P30408 202 aa5□□□□□ -1.61
CD44-236ENST00000533222 CEACAM3P40198 252 aa5□□□□□ -1.61
CD44-236ENST00000533222 ACLYP53396 1101 aa5□□□□□ -1.61
CD44-236ENST00000533222 NAPAP54920 295 aa5□□□□□ -1.61
CD44-236ENST00000533222 TPI1P60174 286 aa5□□□□□ -1.61
CD44-236ENST00000533222 SHC2P98077 582 aa5□□□□□ -1.61
CD44-236ENST00000533222 PITPNAQ00169 270 aa5□□□□□ -1.61
CD44-236ENST00000533222 ZNF616Q08AN1 781 aa5□□□□□ -1.61
CD44-236ENST00000533222 IRF3Q14653 427 aa5□□□□□ -1.61
CD44-236ENST00000533222 HLXQ14774 488 aaPredicted RBP5□□□□□ -1.61
CD44-236ENST00000533222 SURF2Q15527 256 aaPredicted RBP5□□□□□ -1.61
CD44-236ENST00000533222 ZNF79Q15937 498 aa5□□□□□ -1.61
CD44-236ENST00000533222 C18orf21Q32NC0 220 aaPredicted RBP5□□□□□ -1.61
CD44-236ENST00000533222 ARHGAP15Q53QZ3 475 aa5□□□□□ -1.61
CD44-236ENST00000533222 CARD16Q5EG05 197 aa5□□□□□ -1.61
CD44-236ENST00000533222 SDHAF4Q5VUM1 108 aa5□□□□□ -1.61
CD44-236ENST00000533222 TMEM236Q5W0B7 351 aa5□□□□□ -1.61
CD44-236ENST00000533222 AWAT2Q6E213 333 aa5□□□□□ -1.61
CD44-236ENST00000533222 OR2A2Q6IF42 318 aa5□□□□□ -1.61
CD44-236ENST00000533222 TRAT1Q6PIZ9 186 aa5□□□□□ -1.61
CD44-236ENST00000533222 LCLAT1Q6UWP7 414 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms