RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 NME4O00746 187 aa26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 RNF13O43567 381 aa26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 IGHV4-39P01824 125 aa26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 MT-ND1P03886 318 aa26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 THRBP10828 461 aa26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 NUDT2P50583 147 aa26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 UGT2B15P54855 530 aa26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 BIDP55957 195 aa26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 CLEC12BQ2HXU8 276 aa26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 CLEC9AQ6UXN8 241 aa26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 SLC35D2Q76EJ3 337 aa26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 PFN4Q8NHR9 129 aa26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 LZICQ8WZA0 190 aa26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 CMTM5Q96DZ9 223 aa26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 ADAD1Q96M93 576 aaKnown RBP26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 KCNS3Q9BQ31 491 aa26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 NSRP1Q9H0G5 558 aaKnown RBP26.38■■□□□ 1.81
SSSCA1-207ENST00000533115 NDUFS7O75251 213 aa26.37■■□□□ 1.81
SSSCA1-207ENST00000533115 SEC14L2O76054 403 aa26.37■■□□□ 1.81
SSSCA1-207ENST00000533115 IGKV3-15P01624 115 aa26.37■■□□□ 1.81
SSSCA1-207ENST00000533115 IGLV1-44P01699 117 aa26.37■■□□□ 1.81
SSSCA1-207ENST00000533115 APOBEC3AP31941 199 aaPredicted RBP26.37■■□□□ 1.81
SSSCA1-207ENST00000533115 NANOGNBQ7Z5D8 188 aa26.37■■□□□ 1.81
SSSCA1-207ENST00000533115 CCDC36Q8IYA8 594 aa26.37■■□□□ 1.81
SSSCA1-207ENST00000533115 OR6X1Q8NH79 312 aa26.37■■□□□ 1.81
SSSCA1-207ENST00000533115 TMEM239Q8WW34 195 aa26.37■■□□□ 1.81
SSSCA1-207ENST00000533115 HS6ST2Q96MM7 605 aa26.37■■□□□ 1.81
SSSCA1-207ENST00000533115 CACNG6Q9BXT2 260 aa26.37■■□□□ 1.81
SSSCA1-207ENST00000533115 ULBP2Q9BZM5 246 aa26.37■■□□□ 1.81
SSSCA1-207ENST00000533115 GDF2Q9UK05 429 aaPredicted RBP26.37■■□□□ 1.81
SSSCA1-207ENST00000533115 CXCR6O00574 342 aa26.36■■□□□ 1.81
SSSCA1-207ENST00000533115 GSTA4O15217 222 aa26.36■■□□□ 1.81
SSSCA1-207ENST00000533115 SNX3O60493 162 aa26.36■■□□□ 1.81
SSSCA1-207ENST00000533115 IGF2P01344 180 aa26.36■■□□□ 1.81
SSSCA1-207ENST00000533115 CRYAAP02489 173 aa26.36■■□□□ 1.81
SSSCA1-207ENST00000533115 CECR9P0C854 216 aa26.36■■□□□ 1.81
SSSCA1-207ENST00000533115 CBR1P16152 277 aa26.36■■□□□ 1.81
SSSCA1-207ENST00000533115 DRD4P21917 467 aa26.36■■□□□ 1.81
SSSCA1-207ENST00000533115 LSP1P33241 339 aa26.36■■□□□ 1.81
SSSCA1-207ENST00000533115 CSNK1A1P48729 337 aa26.36■■□□□ 1.81
SSSCA1-207ENST00000533115 BARX1Q9HBU1 254 aaPredicted RBP26.36■■□□□ 1.81
SSSCA1-207ENST00000533115 POFUT2Q9Y2G5 429 aa26.36■■□□□ 1.81
SSSCA1-207ENST00000533115 OR7A10O76100 309 aa26.35■■□□□ 1.81
SSSCA1-207ENST00000533115 FUT1P19526 365 aa26.35■■□□□ 1.81
SSSCA1-207ENST00000533115 ACVR1BP36896 505 aa26.35■■□□□ 1.81
SSSCA1-207ENST00000533115 GSK3BP49841 420 aa26.35■■□□□ 1.81
SSSCA1-207ENST00000533115 NAAAQ02083 359 aa26.35■■□□□ 1.81
SSSCA1-207ENST00000533115 TNK1Q13470 666 aa26.35■■□□□ 1.81
SSSCA1-207ENST00000533115 ZNF627Q7L945 461 aa26.35■■□□□ 1.81
SSSCA1-207ENST00000533115 CPLX4Q7Z7G2 160 aa26.35■■□□□ 1.81
SSSCA1-207ENST00000533115 SGTBQ96EQ0 304 aa26.35■■□□□ 1.81
SSSCA1-207ENST00000533115 PRRC1Q96M27 445 aa26.35■■□□□ 1.81
SSSCA1-207ENST00000533115 A4GNTQ9UNA3 340 aa26.35■■□□□ 1.81
SSSCA1-207ENST00000533115 ZNF503-AS2A6NEH8 195 aa26.34■■□□□ 1.81
SSSCA1-207ENST00000533115 BLOC1S5-TXNDC5H3BN57 136 aa26.34■■□□□ 1.81
SSSCA1-207ENST00000533115 NDUFAB1O14561 156 aa26.34■■□□□ 1.81
SSSCA1-207ENST00000533115 ARR3P36575 388 aa26.34■■□□□ 1.81
SSSCA1-207ENST00000533115 CAPZA2P47755 286 aa26.34■■□□□ 1.81
SSSCA1-207ENST00000533115 ST3GAL3Q11203 375 aa26.34■■□□□ 1.81
SSSCA1-207ENST00000533115 Q71RC1 249 aaPredicted RBP26.34■■□□□ 1.81
SSSCA1-207ENST00000533115 VTCN1Q7Z7D3 282 aa26.34■■□□□ 1.81
SSSCA1-207ENST00000533115 TMEM54Q969K7 222 aa26.34■■□□□ 1.81
SSSCA1-207ENST00000533115 SEC61A2Q9H9S3 476 aa26.34■■□□□ 1.81
SSSCA1-207ENST00000533115 C20orf141Q9NUB4 165 aa26.34■■□□□ 1.81
SSSCA1-207ENST00000533115 MED31Q9Y3C7 131 aa26.34■■□□□ 1.81
SSSCA1-207ENST00000533115 GMNCA6NCL1 334 aa26.33■■□□□ 1.81
SSSCA1-207ENST00000533115 LY6G6DO95868 133 aa26.33■■□□□ 1.81
SSSCA1-207ENST00000533115 HEXAP06865 529 aa26.33■■□□□ 1.81
SSSCA1-207ENST00000533115 PRDX6P30041 224 aa26.33■■□□□ 1.81
SSSCA1-207ENST00000533115 IFNA8P32881 189 aa26.33■■□□□ 1.81
SSSCA1-207ENST00000533115 MELKQ14680 651 aa26.33■■□□□ 1.81
SSSCA1-207ENST00000533115 ZNF813Q6ZN06 617 aa26.33■■□□□ 1.81
SSSCA1-207ENST00000533115 CBLL1Q75N03 491 aa26.33■■□□□ 1.81
SSSCA1-207ENST00000533115 MDP1Q86V88 176 aa26.33■■□□□ 1.81
SSSCA1-207ENST00000533115 SLC25A44Q96H78 314 aaPredicted RBP26.33■■□□□ 1.81
SSSCA1-207ENST00000533115 GLTPQ9NZD2 209 aa26.33■■□□□ 1.81
SSSCA1-207ENST00000533115 ZNF682O95780 498 aa26.32■■□□□ 1.8
SSSCA1-207ENST00000533115 IFNW1P05000 195 aa26.32■■□□□ 1.8
SSSCA1-207ENST00000533115 CELA3BP08861 270 aa26.32■■□□□ 1.8
SSSCA1-207ENST00000533115 CALCRP30988 508 aa26.32■■□□□ 1.8
SSSCA1-207ENST00000533115 IDH3GP51553 393 aaPredicted RBP26.32■■□□□ 1.8
SSSCA1-207ENST00000533115 PSME3P61289 254 aa26.32■■□□□ 1.8
SSSCA1-207ENST00000533115 CHRNB3Q05901 458 aa26.32■■□□□ 1.8
SSSCA1-207ENST00000533115 RPL18Q07020 188 aaKnown RBP26.32■■□□□ 1.8
SSSCA1-207ENST00000533115 MYPOPQ86VE0 399 aaPredicted RBP26.32■■□□□ 1.8
SSSCA1-207ENST00000533115 LIPHQ8WWY8 451 aa26.32■■□□□ 1.8
SSSCA1-207ENST00000533115 ZNF566Q969W8 418 aa26.32■■□□□ 1.8
SSSCA1-207ENST00000533115 FOXB1Q99853 325 aa26.32■■□□□ 1.8
SSSCA1-207ENST00000533115 KCTD14Q9BQ13 255 aaPredicted RBP26.32■■□□□ 1.8
SSSCA1-207ENST00000533115 B3GNT2Q9NY97 397 aa26.32■■□□□ 1.8
SSSCA1-207ENST00000533115 ABCD2Q9UBJ2 740 aa26.32■■□□□ 1.8
SSSCA1-207ENST00000533115 ZANQ9Y493 2812 aa26.32■■□□□ 1.8
SSSCA1-207ENST00000533115 BCL10O95999 233 aa26.31■■□□□ 1.8
SSSCA1-207ENST00000533115 BMP4P12644 408 aa26.31■■□□□ 1.8
SSSCA1-207ENST00000533115 B4GALT1P15291 398 aa26.31■■□□□ 1.8
SSSCA1-207ENST00000533115 GYS2P54840 703 aa26.31■■□□□ 1.8
SSSCA1-207ENST00000533115 DNM1P46Q6ZS02 220 aa26.31■■□□□ 1.8
SSSCA1-207ENST00000533115 GEMIN6Q8WXD5 167 aaKnown RBP26.31■■□□□ 1.8
SSSCA1-207ENST00000533115 CA10Q9NS85 328 aa26.31■■□□□ 1.8
SSSCA1-207ENST00000533115 SNX13Q9Y5W8 968 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms