RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 AMIGO2Q86SJ2 522 aa19.66■□□□□ 0.74
LRRK1-208ENST00000532029 C20orf196Q8IYI0 205 aa19.66■□□□□ 0.74
LRRK1-208ENST00000532029 OR5K1Q8NHB7 308 aa19.66■□□□□ 0.74
LRRK1-208ENST00000532029 ASB10Q8WXI3 467 aa19.66■□□□□ 0.74
LRRK1-208ENST00000532029 STMN2Q93045 179 aa19.66■□□□□ 0.74
LRRK1-208ENST00000532029 KISS1RQ969F8 398 aaPredicted RBP19.66■□□□□ 0.74
LRRK1-208ENST00000532029 ZNF566Q969W8 418 aa19.66■□□□□ 0.74
LRRK1-208ENST00000532029 NRBF2Q96F24 287 aa19.66■□□□□ 0.74
LRRK1-208ENST00000532029 SLC25A44Q96H78 314 aaPredicted RBP19.66■□□□□ 0.74
LRRK1-208ENST00000532029 FEVQ99581 238 aa19.66■□□□□ 0.74
LRRK1-208ENST00000532029 KATNB1Q9BVA0 655 aa19.66■□□□□ 0.74
LRRK1-208ENST00000532029 HDHD5Q9BXW7 423 aa19.66■□□□□ 0.74
LRRK1-208ENST00000532029 OR52D1Q9H346 318 aa19.66■□□□□ 0.74
LRRK1-208ENST00000532029 CACNA1CQ13936 2221 aa19.66■□□□□ 0.74
LRRK1-208ENST00000532029 M0R3G1 203 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 UPK3AO75631 287 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 IGHG1P01857 330 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 IGHMP01871 453 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 CD14P08571 375 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 PSMB1P20618 241 aaKnown RBP19.65■□□□□ 0.74
LRRK1-208ENST00000532029 IGHV1-2P23083 117 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 SLC6A6P31641 620 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 CSNK1A1P48729 337 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 RPL27P61353 136 aaKnown RBP19.65■□□□□ 0.74
LRRK1-208ENST00000532029 ERVK-25P63136 954 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 LGALS3BPQ08380 585 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 SNTB1Q13884 538 aaKnown RBP19.65■□□□□ 0.74
LRRK1-208ENST00000532029 HMBOX1Q6NT76 420 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 RPL13AP3Q6NVV1 102 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 STEAP2Q8NFT2 490 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 LRR1Q96L50 414 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 ALKBH3Q96Q83 286 aaPredicted RBP19.65■□□□□ 0.74
LRRK1-208ENST00000532029 ENKD1Q9H0I2 346 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 ZNF556Q9HAH1 456 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 SLC24A3Q9HC58 644 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 TAS2R16Q9NYV7 291 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 GRHPRQ9UBQ7 328 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 NDRG3Q9UGV2 375 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 ZNF346Q9UL40 294 aaKnown RBP19.65■□□□□ 0.74
LRRK1-208ENST00000532029 CDH10Q9Y6N8 788 aa19.65■□□□□ 0.74
LRRK1-208ENST00000532029 CIB4A0PJX0 185 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 TUBAL3A6NHL2 446 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 LYZL6O75951 148 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 ANXA8P13928 327 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 COX6B1P14854 86 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 ZNF26P17031 533 aaPredicted RBP19.64■□□□□ 0.73
LRRK1-208ENST00000532029 IGFBP2P18065 325 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 COX5AP20674 150 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 CLRN1P58418 232 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 ROR2Q01974 943 aaKnown RBP19.64■□□□□ 0.73
LRRK1-208ENST00000532029 RFX4Q33E94 735 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 ARMC4Q5T2S8 1044 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 C9orf135Q5VTT2 229 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 FAM205BPQ63HN1 556 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 THSD4Q6ZMP0 1018 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 DPY19L2P2Q6ZN68 376 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 ZNF620Q6ZNG0 422 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 RASSF6Q6ZTQ3 369 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 BHLHA15Q7RTS1 189 aaPredicted RBP19.64■□□□□ 0.73
LRRK1-208ENST00000532029 HIPK1Q86Z02 1210 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 DMRTC2Q8IXT2 367 aaPredicted RBP19.64■□□□□ 0.73
LRRK1-208ENST00000532029 HS3ST5Q8IZT8 346 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 OR52L1Q8NGH7 329 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 CENPNQ96H22 339 aaPredicted RBP19.64■□□□□ 0.73
LRRK1-208ENST00000532029 SAMD8Q96LT4 415 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 TSPAN32Q96QS1 320 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 GPX7Q96SL4 187 aaPredicted RBP19.64■□□□□ 0.73
LRRK1-208ENST00000532029 SPOCK3Q9BQ16 436 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 S100A14Q9HCY8 104 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 KIF17Q9P2E2 1029 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 IL20RAQ9UHF4 553 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 HCFC1P51610 2035 aa19.64■□□□□ 0.73
LRRK1-208ENST00000532029 SPTBN1Q01082 2364 aaKnown RBP19.64■□□□□ 0.73
LRRK1-208ENST00000532029 A6NIZ1 184 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 H3BNX3 289 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 ACADSP16219 412 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 ZNF23P17027 643 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 PRKACGP22612 351 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 COL8A1P27658 744 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 MPGP29372 298 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 ACVR1BP36896 505 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 KIR2DL3P43628 341 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 RPS6KA3P51812 740 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 FXYD6P3P58550 94 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 RAP1BP61224 184 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 RAP1AP62834 184 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 TGFBR3Q03167 851 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 COX10Q12887 443 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 TSC22D1Q15714 1073 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 WDFY1Q8IWB7 410 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 ZNF433Q8N7K0 673 aaPredicted RBP19.63■□□□□ 0.73
LRRK1-208ENST00000532029 ATG16L2Q8NAA4 619 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 TMEM54Q969K7 222 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 ZNF570Q96NI8 536 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 NIPSNAP1Q9BPW8 284 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 ULBP2Q9BZM5 246 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 ACTR6Q9GZN1 396 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 SEMA6AQ9H2E6 1030 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 NRIP3Q9NQ35 241 aa19.63■□□□□ 0.73
LRRK1-208ENST00000532029 ADAM18Q9Y3Q7 739 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms