RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 ALX4Q9H161 411 aaPredicted RBP2.8□□□□□ -1.96
PTPRK-220ENST00000531466 SDCBP2Q9H190 292 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 TRABDQ9H4I3 376 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 ELOVL6Q9H5J4 265 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 LPAR2Q9HBW0 351 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 PXMP2Q9NR77 195 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 IMP3Q9NV31 184 aaKnown RBP2.8□□□□□ -1.96
PTPRK-220ENST00000531466 THUMPD1Q9NXG2 353 aaKnown RBP2.8□□□□□ -1.96
PTPRK-220ENST00000531466 ADA2Q9NZK5 511 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 GPR132Q9UNW8 380 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 FOXA2Q9Y261 457 aaPredicted RBP2.8□□□□□ -1.96
PTPRK-220ENST00000531466 PIGLQ9Y2B2 252 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 ARL2BPQ9Y2Y0 163 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 STARD10Q9Y365 291 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 GMPPBQ9Y5P6 360 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 URGCP-MRPS24S4R325 110 aa2.8□□□□□ -1.96
PTPRK-220ENST00000531466 CEP162Q5TB80 1403 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 TRBV11-1A0A0K0K1C0 115 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 A0A1B0GV72 72 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 TMEM238C9JI98 176 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 NPIPA3F8WFD2 350 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 M0R036 132 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 GOSR2O14653 212 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 CTDSPLO15194 276 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 EMC8O43402 210 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 TNFSF12O43508 249 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 DPM1O60762 260 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 BCAS1O75363 584 aaPredicted RBP2.79□□□□□ -1.96
PTPRK-220ENST00000531466 NME6O75414 186 aaPredicted RBP2.79□□□□□ -1.96
PTPRK-220ENST00000531466 ZMPSTE24O75844 475 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 KBTBD11O94819 623 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 OR2F2O95006 317 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 OR4F21O95013 312 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 LYPLA2O95372 231 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 PLEKHA8P1O95397 391 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 H6PDO95479 791 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 CST4P01036 141 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 TFPTP0C1Z6 253 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 SMIM10L1P0DMW3 83 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 SLC2A1P11166 492 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 NR2C1P13056 603 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 TSPAN8P19075 237 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 PRDX6P30041 224 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 OR1E1P30953 314 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 UGT1A3P35503 534 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 UGT1A5P35504 534 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 GSSP48637 474 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 NPY2RP49146 381 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 RGS6P49758 472 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 STK19P49842 368 aaPredicted RBP2.79□□□□□ -1.96
PTPRK-220ENST00000531466 ZNF133P52736 654 aaPredicted RBP2.79□□□□□ -1.96
PTPRK-220ENST00000531466 NAPAP54920 295 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 PEX3P56589 373 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 SLC34A1Q06495 639 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 CKAP4Q07065 602 aaKnown RBP2.79□□□□□ -1.96
PTPRK-220ENST00000531466 SLC3A1Q07837 685 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 IL10RBQ08334 325 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 IL18R1Q13478 541 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 ALKBH6Q3KRA9 238 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 COX19Q49B96 90 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 CELF3Q5SZQ8 465 aaKnown RBP2.79□□□□□ -1.96
PTPRK-220ENST00000531466 OR5M10Q6IEU7 315 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 ZNF544Q6NX49 715 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 RNASEKQ6P5S7 137 aaKnown RBP2.79□□□□□ -1.96
PTPRK-220ENST00000531466 TMEM220Q6QAJ8 160 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 C5orf46Q6UWT4 87 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 BTNL8Q6UX41 500 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 LHFPL4Q7Z7J7 247 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 ANKRD46Q86W74 232 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 MEX3DQ86XN8 651 aaKnown RBP2.79□□□□□ -1.96
PTPRK-220ENST00000531466 TMEM126BQ8IUX1 230 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 CROCCP3Q8IVE0 287 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 VSTM4Q8IW00 320 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 KLHDC8AQ8IYD2 350 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 STK40Q8N2I9 435 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 TEX26Q8N6G2 289 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 FAM86B1Q8N7N1 296 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 CYB561A3Q8NBI2 242 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 CCDC54Q8NEL0 328 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 OR5D13Q8NGL4 314 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 OR4A15Q8NGL6 344 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 OR2V1Q8NHB1 315 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 MARCH1Q8TCQ1 289 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 UBTD2Q8WUN7 234 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 TMEM239Q8WW34 195 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 CACNG8Q8WXS5 425 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 ASB9Q96DX5 294 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 SMIM10Q96HG1 83 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 C4orf36Q96KX1 117 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 P2RY13Q9BPV8 354 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 EBF4Q9BQW3 602 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 UTP23Q9BRU9 249 aaKnown RBP2.79□□□□□ -1.96
PTPRK-220ENST00000531466 ZNF2Q9BSG1 426 aaPredicted RBP2.79□□□□□ -1.96
PTPRK-220ENST00000531466 DCUN1D5Q9BTE7 237 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 TIPINQ9BVW5 301 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 ROPN1BQ9BZX4 212 aaPredicted RBP2.79□□□□□ -1.96
PTPRK-220ENST00000531466 CCDC90BQ9GZT6 254 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 WWP1Q9H0M0 922 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 LYRM4Q9HD34 91 aa2.79□□□□□ -1.96
PTPRK-220ENST00000531466 PLSCR3Q9NRY6 295 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms