RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 FTCDNL1E5RQL4 147 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 E9PBE3 544 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 OR2T1O43869 369 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 UBL3O95164 117 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 MYZAPP0CAP1 466 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 HLA-DOBP13765 273 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 ETFAP13804 333 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 ZNF14P17017 642 aaPredicted RBP7.89□□□□□ -1.15
NEDD8-206ENST00000531430 LBPP18428 481 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 RPS4Y1P22090 263 aaKnown RBP7.89□□□□□ -1.15
NEDD8-206ENST00000531430 CRISP3P54108 245 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 POU3F1Q03052 451 aaPredicted RBP7.89□□□□□ -1.15
NEDD8-206ENST00000531430 RBBP4Q09028 425 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 IFFO1Q0D2I5 559 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 PMS2P3Q13401 168 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 SMU1Q2TAY7 513 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 HFEQ30201 348 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 USP51Q70EK9 711 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 RETREG3Q86VR2 466 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 C20orf196Q8IYI0 205 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 SYNPRQ8TBG9 265 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 ST7LQ8TDW4 575 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 C11orf40Q8WZ69 217 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 CCL17Q92583 94 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 TESCQ96BS2 214 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 TIMD4Q96H15 378 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 PKNOX2Q96KN3 472 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 TEX37Q96LM6 180 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 CCDC115Q96NT0 180 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 DCLRE1CQ96SD1 692 aaKnown RBP7.89□□□□□ -1.15
NEDD8-206ENST00000531430 ZBTB18Q99592 522 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 GAL3ST1Q99999 423 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 PTDSS2Q9BVG9 487 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 SPATA9Q9BWV2 254 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 NUF2Q9BZD4 464 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 ULBP2Q9BZM5 246 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 PPCSQ9HAB8 311 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 CDH20Q9HBT6 801 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 MED29Q9NX70 200 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 ASIC5Q9NY37 505 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 CALML5Q9NZT1 146 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 SELENONQ9NZV5 590 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 BTNL2Q9UIR0 455 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 WIPI2Q9Y4P8 454 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 CACNG2Q9Y698 323 aa7.89□□□□□ -1.15
NEDD8-206ENST00000531430 C11orf98E9PRG8 122 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 MS4A18H0YCH9 400 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 J3QLI3 93 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 RFXANKO14593 260 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 SPRY3O43610 288 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 NPIPB7O75200 414 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 RP2O75695 350 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 HPRP00739 348 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 CCNOP22674 350 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 CRYBB2P43320 205 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 RPL14P50914 215 aaKnown RBP7.88□□□□□ -1.15
NEDD8-206ENST00000531430 KLF3P57682 345 aaPredicted RBP7.88□□□□□ -1.15
NEDD8-206ENST00000531430 DSTNP60981 165 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 ERVS71-1P61550 626 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 MRPS11P82912 194 aaKnown RBP7.88□□□□□ -1.15
NEDD8-206ENST00000531430 EGR4Q05215 589 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 FXNQ16595 210 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 DPY19L1Q2PZI1 675 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 MS4A18Q3C1V0 323 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 NET1Q7Z628 596 aaPredicted RBP7.88□□□□□ -1.15
NEDD8-206ENST00000531430 SNX32Q86XE0 403 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 WDFY1Q8IWB7 410 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 SKA3Q8IX90 412 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 BCL6BQ8N143 479 aaPredicted RBP7.88□□□□□ -1.15
NEDD8-206ENST00000531430 FGFBP3Q8TAT2 258 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 SLC38A5Q8WUX1 472 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 SLC38A4Q969I6 547 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 FOXB1Q99853 325 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 SH3GL3Q99963 347 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 ASPNQ9BXN1 380 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 ZNF385DQ9H6B1 395 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 B3GAT1Q9P2W7 334 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 SLC7A8Q9UHI5 535 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 IFT52Q9Y366 437 aa7.88□□□□□ -1.15
NEDD8-206ENST00000531430 TRAV36DV7A0A075B6V5 113 aa7.87□□□□□ -1.15
NEDD8-206ENST00000531430 A0A0G2JPF8 293 aa7.87□□□□□ -1.15
NEDD8-206ENST00000531430 SLC22A23A1A5C7 686 aa7.87□□□□□ -1.15
NEDD8-206ENST00000531430 HNRNPCL2B2RXH8 293 aa7.87□□□□□ -1.15
NEDD8-206ENST00000531430 HNRNPCL3B7ZW38 293 aa7.87□□□□□ -1.15
NEDD8-206ENST00000531430 C5orf58C9J3I9 102 aa7.87□□□□□ -1.15
NEDD8-206ENST00000531430 TRAF3IP2O43734 574 aaPredicted RBP7.87□□□□□ -1.15
NEDD8-206ENST00000531430 HNRNPCL1O60812 293 aaKnown RBP7.87□□□□□ -1.15
NEDD8-206ENST00000531430 OR6A2O95222 327 aa7.87□□□□□ -1.15
NEDD8-206ENST00000531430 GPANK1O95872 356 aa7.87□□□□□ -1.15
NEDD8-206ENST00000531430 IGHV2-5P01817 119 aa7.87□□□□□ -1.15
NEDD8-206ENST00000531430 MT-ND5P03915 603 aa7.87□□□□□ -1.15
NEDD8-206ENST00000531430 SERPINA5P05154 406 aa7.87□□□□□ -1.15
NEDD8-206ENST00000531430 SBK2P0C263 348 aa7.87□□□□□ -1.15
NEDD8-206ENST00000531430 HNRNPCL4P0DMR1 293 aa7.87□□□□□ -1.15
NEDD8-206ENST00000531430 OMGP23515 440 aa7.87□□□□□ -1.15
NEDD8-206ENST00000531430 PRTN3P24158 256 aa7.87□□□□□ -1.15
NEDD8-206ENST00000531430 CSNK1A1P48729 337 aa7.87□□□□□ -1.15
NEDD8-206ENST00000531430 ABCE1P61221 599 aaKnown RBP7.87□□□□□ -1.15
NEDD8-206ENST00000531430 TXNL4AP83876 142 aaKnown RBP7.87□□□□□ -1.15
NEDD8-206ENST00000531430 MAPK11Q15759 364 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms